SRR27792542 (PRJNA1071172)

Processing Status: Not Yet Started

General Details

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Sample Name GSM8047418
Organism Homo sapiens
Release Date 10/2024

Sample Links

Run Details

Spots 82149624
Total Bases 12404593224
Total Bases 12404593224

Repository Details

SRA SRR27792542
ENA SRR27792542
BioProject PRJNA1071172

Experiment Details

Title Riboseq_KO_water_Rep1

Sample Details

Run Accession SRR27792542
Total Number Of Spots (Original File)) 82149624
Total Number Of Bases (Original File) 12404593224
Average Read Length 151
Original File Size (Mb) 4472
Experiment Id SRX23456179
Library Name GSM8047418
Library Strategy OTHER
Library Selection other
Library Source TRANSCRIPTOMIC
Library Layout SINGLE
Insert Size 0
Insert Deviation 0
Platform ILLUMINA
Model Illumina NovaSeq 6000
Sra Project Accession (Srp) SRP486953
Pubmed Id <NA>
Sample SRS20309215
Biosample SAMN39681383
Sample Type simple
Organism Taxid 9606
Organism Homo sapiens
Sample Name GSM8047418
Center Name UCSF
Submission SRA1794749
Month 10
Year 2024
Author Aghi
Sample Source Bone
Sample Title Riboseq_KO_water_Rep1
Library-Type Ribo-Seq
Replicate-Number 1.0
Condition KO
Tissue Bone
Cell-Line U-2OSepithelial
Genotype G3BP1/2 KO, G3BP deletions by CRISPR Cas9 machinery (doi: 10.1083/jcb.201508028)
Run Accession Study Accession Scientific Name Description Cell Line Library Type Treatment Trips-Viz GWIPS-viz Reads BAM BigWig (F) BigWig (R)
SRR27792542 Homo sapiens Bone U-2OSepithelial Ribo-Seq
Run Accession Study Accession Scientific Name Description Cell Line Library Type Treatment Trips-Viz GWIPS-viz Reads BAM BigWig (F) BigWig (R)

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