SRR27792542 (PRJNA1071172)
Processing Status: Not Yet Started
General Details
Sample Name | GSM8047418 |
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Organism | Homo sapiens |
Release Date | 10/2024 |
Sample Links
GWIPS-viz | Trips-Viz | Custom Track |
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Run Details
Spots | 82149624 |
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Total Bases | 12404593224 |
Total Bases | 12404593224 |
Repository Details
SRA | SRR27792542 |
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ENA | SRR27792542 |
BioProject | PRJNA1071172 |
Experiment Details
Title | Riboseq_KO_water_Rep1 |
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Sample Details
Run Accession | SRR27792542 |
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Total Number Of Spots (Original File)) | 82149624 |
Total Number Of Bases (Original File) | 12404593224 |
Average Read Length | 151 |
Original File Size (Mb) | 4472 |
Experiment Id | SRX23456179 |
Library Name | GSM8047418 |
Library Strategy | OTHER |
Library Selection | other |
Library Source | TRANSCRIPTOMIC |
Library Layout | SINGLE |
Insert Size | 0 |
Insert Deviation | 0 |
Platform | ILLUMINA |
Model | Illumina NovaSeq 6000 |
Sra Project Accession (Srp) | SRP486953 |
Pubmed Id | <NA> |
Sample | SRS20309215 |
Biosample | SAMN39681383 |
Sample Type | simple |
Organism Taxid | 9606 |
Organism | Homo sapiens |
Sample Name | GSM8047418 |
Center Name | UCSF |
Submission | SRA1794749 |
Month | 10 |
Year | 2024 |
Author | Aghi |
Sample Source | Bone |
Sample Title | Riboseq_KO_water_Rep1 |
Library-Type | Ribo-Seq |
Replicate-Number | 1.0 |
Condition | KO |
Tissue | Bone |
Cell-Line | U-2OSepithelial |
Genotype | G3BP1/2 KO, G3BP deletions by CRISPR Cas9 machinery (doi: 10.1083/jcb.201508028) |
Run Accession | Study Accession | Scientific Name | Description | Cell Line | Library Type | Treatment | Trips-Viz | GWIPS-viz | Reads | BAM | BigWig (F) | BigWig (R) | |
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SRR27792542 | Homo sapiens | Bone | U-2OSepithelial | Ribo-Seq | |||||||||
Run Accession | Study Accession | Scientific Name | Description | Cell Line | Library Type | Treatment | Trips-Viz | GWIPS-viz | Reads | BAM | BigWig (F) | BigWig (R) |
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