SRR3488643 (PRJNA321057)

Processing Status: Completed

General Details

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Sample Name GSM2147484
Organism Mus musculus
Release Date 5/2016

Sample Links

Run Details

Spots 57811396
Total Bases 2948381196
Total Bases 2948381196

Repository Details

SRA SRR3488643
ENA SRR3488643
BioProject PRJNA321057

Experiment Details

Title GFP-TTP RiboSeq Replicate 1

Sample Details

Run Accession SRR3488643
Total Number Of Spots (Original File)) 57811396
Total Number Of Bases (Original File) 2948381196
Average Read Length 51
Original File Size (Mb) 1844
Experiment Id SRX1750681
Library Strategy OTHER
Library Selection other
Library Source TRANSCRIPTOMIC
Library Layout SINGLE
Insert Size 0
Insert Deviation 0
Platform ILLUMINA
Model Illumina HiSeq 2500
Sra Project Accession (Srp) SRP074604
Pubmed Id 27220464
Sample SRS1428470
Biosample SAMN04964647
Sample Type simple
Organism Taxid 10090
Organism Mus musculus
Sample Name GSM2147484
Center Name GEO
Submission SRA424310
Month 5
Year 2016
Author Tiedje
Sample Source macrophages
Sample Title GFP-TTP RiboSeq Replicate 1
Library-Type Ribo-Seq
Replicate-Number 1.0
Tissue Bone
Cell-Line bone marrow-derived macrophages (BMDMs)_immortalized primary cells
Plasmid GFP-TTP vector
Stimulation 6h Doxycycline/1h LPS
Run Accession Study Accession Scientific Name Description Cell Line Library Type Treatment Trips-Viz GWIPS-viz Reads BAM BigWig (F) BigWig (R)
SRR3488643 Mus musculus macrophages bone marrow-derived macrophages (BMDMs)_immortalized primary cells Ribo-Seq
Run Accession Study Accession Scientific Name Description Cell Line Library Type Treatment Trips-Viz GWIPS-viz Reads BAM BigWig (F) BigWig (R)

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