SRR3494987 (PRJNA321185)
Processing Status: Failed
General Details
| Sample Name | GSM2149116 |
|---|---|
| Organism | Mus musculus |
| Release Date | 4/2017 |
Sample Links
| GWIPS-viz | Trips-Viz | Custom Track |
|---|---|---|
| Visit GWIPS-viz |
Run Details
| Spots | 36851524 |
|---|---|
| Total Bases | 3722003924 |
| Total Bases | 3722003924 |
Repository Details
| SRA | SRR3494987 |
|---|---|
| ENA | SRR3494987 |
| BioProject | PRJNA321185 |
Experiment Details
| Title | RPZT14_1; ZT14, ribosome footprint, rep1 |
|---|
Sample Details
| Run Accession | SRR3494987 |
|---|---|
| Total Number Of Spots (Original File)) | 36851524 |
| Total Number Of Bases (Original File) | 3722003924 |
| Average Read Length | 101 |
| Original File Size (Mb) | 2060 |
| Experiment Id | SRX1754788 |
| Library Strategy | RNA-Seq |
| Library Selection | cDNA |
| Library Source | TRANSCRIPTOMIC |
| Library Layout | SINGLE |
| Insert Size | 0 |
| Insert Deviation | 0 |
| Platform | ILLUMINA |
| Model | Illumina HiSeq 2500 |
| Sra Project Accession (Srp) | SRP074765 |
| Pubmed Id | 28622766 |
| Sample | SRS1431718 |
| Biosample | SAMN04967955 |
| Sample Type | simple |
| Organism Taxid | 10090 |
| Organism | Mus musculus |
| Sample Name | GSM2149116 |
| Center Name | GEO |
| Submission | SRA424589 |
| Month | 4 |
| Year | 2017 |
| Author | Castelo-Szekely |
| Sample Source | kidney |
| Sample Title | RPZT14_1; ZT14, ribosome footprint, rep1 |
| Library-Type | Ribo-Seq |
| Replicate-Number | 1.0 |
| Timepoint | ZT2 |
| Tissue | Kidney |
| Sex | male |
| Strain | C57BL/6JRj |
| Age | 11-12 weeks |
| Run Accession | Study Accession | Scientific Name | Description | Cell Line | Library Type | Treatment | Trips-Viz | GWIPS-viz | Reads | BAM | BigWig (F) | BigWig (R) | |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| SRR3494987 | Mus musculus | kidney | Ribo-Seq |  |
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| Run Accession | Study Accession | Scientific Name | Description | Cell Line | Library Type | Treatment | Trips-Viz | GWIPS-viz | Reads | BAM | BigWig (F) | BigWig (R) |
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