SRR392978 (PRJNA150397)

Processing Status: Not Yet Started

General Details

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Sample Name GSM854428
Organism Danio rerio
Release Date 3/2012

Sample Links

Run Details

Spots 3606003
Total Bases 259632216
Total Bases 259632216

Repository Details

SRA SRR392978
ENA SRR392978
BioProject PRJNA150397

Experiment Details

Title Input mRNA-Seq Wild type 4hpf

Sample Details

Run Accession SRR392978
Total Number Of Spots (Original File)) 3606003
Total Number Of Bases (Original File) 259632216
Average Read Length 72
Original File Size (Mb) 164
Experiment Id SRX113346
Library Name GSM854428: Input mRNA-Seq Wild type 4hpf
Library Strategy RNA-Seq
Library Selection cDNA
Library Source TRANSCRIPTOMIC
Library Layout SINGLE
Insert Size 0
Insert Deviation 0
Platform ILLUMINA
Model Illumina Genome Analyzer II
Sra Project Accession (Srp) SRP010040
Pubmed Id 22422859
Sample SRS284290
Biosample SAMN00769034
Sample Type simple
Organism Taxid 7955
Organism Danio rerio
Sample Name GSM854428
Center Name GEO
Submission SRA048903
Month 3
Year 2012
Author Bazzini
Sample Source Whole embryo, wild type
Sample Title Input mRNA-Seq Wild type 4hpf
Library-Type RNA-Seq
Condition Wild Type
Timepoint 4h
Tissue Embryo
Stage 4hpf
Genotype MZdicer mutant
Run Accession Study Accession Scientific Name Description Cell Line Library Type Treatment Trips-Viz GWIPS-viz Reads BAM BigWig (F) BigWig (R)
SRR392978 Danio rerio Whole embryo, wild type RNA-Seq
Run Accession Study Accession Scientific Name Description Cell Line Library Type Treatment Trips-Viz GWIPS-viz Reads BAM BigWig (F) BigWig (R)

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