SRR392980 (PRJNA150397)

Processing Status: Not Yet Started

General Details

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Sample Name GSM854429
Organism Danio rerio
Release Date 3/2012

Sample Links

Run Details

Spots 3783159
Total Bases 272387448
Total Bases 272387448

Repository Details

SRA SRR392980
ENA SRR392980
BioProject PRJNA150397

Experiment Details

Title Input mRNA-Seq Wild type 4hpf-2

Sample Details

Run Accession SRR392980
Total Number Of Spots (Original File)) 3783159
Total Number Of Bases (Original File) 272387448
Average Read Length 72
Original File Size (Mb) 164
Experiment Id SRX113347
Library Name GSM854429: Input mRNA-Seq Wild type 4hpf-2
Library Strategy RNA-Seq
Library Selection cDNA
Library Source TRANSCRIPTOMIC
Library Layout SINGLE
Insert Size 0
Insert Deviation 0
Platform ILLUMINA
Model Illumina Genome Analyzer II
Sra Project Accession (Srp) SRP010040
Pubmed Id 22422859
Sample SRS284291
Biosample SAMN00769035
Sample Type simple
Organism Taxid 7955
Organism Danio rerio
Sample Name GSM854429
Center Name GEO
Submission SRA048903
Month 3
Year 2012
Author Bazzini
Sample Source Whole embryo, wild type
Sample Title Input mRNA-Seq Wild type 4hpf-2
Library-Type RNA-Seq
Condition Wild Type
Timepoint 4h
Tissue Embryo
Stage 6hpf
Genotype MZdicer mutant
Run Accession Study Accession Scientific Name Description Cell Line Library Type Treatment Trips-Viz GWIPS-viz Reads BAM BigWig (F) BigWig (R)
SRR392980 Danio rerio Whole embryo, wild type RNA-Seq
Run Accession Study Accession Scientific Name Description Cell Line Library Type Treatment Trips-Viz GWIPS-viz Reads BAM BigWig (F) BigWig (R)

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