SRR392987 (PRJNA150397)

Processing Status: Completed

General Details

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Sample Name GSM854432
Organism Danio rerio
Release Date 3/2012

Sample Links

Run Details

Spots 13248077
Total Bases 953861544
Total Bases 953861544

Repository Details

SRA SRR392987
ENA SRR392987
BioProject PRJNA150397

Experiment Details

Title Ribosome protected fragments MZdicer 2hpf

Sample Details

Run Accession SRR392987
Total Number Of Spots (Original File)) 13248077
Total Number Of Bases (Original File) 953861544
Average Read Length 72
Original File Size (Mb) 653
Experiment Id SRX113350
Library Name GSM854432: Ribosome protected fragments MZdicer 2hpf
Library Strategy RNA-Seq
Library Selection cDNA
Library Source TRANSCRIPTOMIC
Library Layout SINGLE
Insert Size 0
Insert Deviation 0
Platform ILLUMINA
Model Illumina Genome Analyzer II
Sra Project Accession (Srp) SRP010040
Pubmed Id 22422859
Sample SRS284294
Biosample SAMN00769038
Sample Type simple
Organism Taxid 7955
Organism Danio rerio
Sample Name GSM854432
Center Name GEO
Submission SRA048903
Month 3
Year 2012
Author Bazzini
Sample Source Whole embryo, MZdicer
Sample Title Ribosome protected fragments MZdicer 2hpf
Library-Type Ribo-Seq
Condition MZ
Timepoint 2h
Tissue Embryo
Stage 6hpf
Genotype wild type
Run Accession Study Accession Scientific Name Description Cell Line Library Type Treatment Trips-Viz GWIPS-viz Reads BAM BigWig (F) BigWig (R)
SRR392987 Danio rerio Whole embryo, MZdicer Ribo-Seq
Run Accession Study Accession Scientific Name Description Cell Line Library Type Treatment Trips-Viz GWIPS-viz Reads BAM BigWig (F) BigWig (R)

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