SRR392990 (PRJNA150397)

Processing Status: Completed

General Details

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Sample Name GSM854434
Organism Danio rerio
Release Date 3/2012

Sample Links

Run Details

Spots 2405865
Total Bases 173222280
Total Bases 173222280

Repository Details

SRA SRR392990
ENA SRR392990
BioProject PRJNA150397

Experiment Details

Title Ribosome protected fragments MZdicer 4hpf

Sample Details

Run Accession SRR392990
Total Number Of Spots (Original File)) 2405865
Total Number Of Bases (Original File) 173222280
Average Read Length 72
Original File Size (Mb) 114
Experiment Id SRX113352
Library Name GSM854434: Ribosome protected fragments MZdicer 4hpf
Library Strategy RNA-Seq
Library Selection cDNA
Library Source TRANSCRIPTOMIC
Library Layout SINGLE
Insert Size 0
Insert Deviation 0
Platform ILLUMINA
Model Illumina Genome Analyzer II
Sra Project Accession (Srp) SRP010040
Pubmed Id 22422859
Sample SRS284296
Biosample SAMN00769040
Sample Type simple
Organism Taxid 7955
Organism Danio rerio
Sample Name GSM854434
Center Name GEO
Submission SRA048903
Month 3
Year 2012
Author Bazzini
Sample Source Whole embryo, MZdicer
Sample Title Ribosome protected fragments MZdicer 4hpf
Library-Type Ribo-Seq
Condition MZ
Timepoint 4h
Tissue Embryo
Stage 4hpf
Genotype MZdicer mutantTUAB
Run Accession Study Accession Scientific Name Description Cell Line Library Type Treatment Trips-Viz GWIPS-viz Reads BAM BigWig (F) BigWig (R)
SRR392990 Danio rerio Whole embryo, MZdicer Ribo-Seq
Run Accession Study Accession Scientific Name Description Cell Line Library Type Treatment Trips-Viz GWIPS-viz Reads BAM BigWig (F) BigWig (R)

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