SRR392993 (PRJNA150397)

Processing Status: Completed

General Details

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Sample Name GSM854435
Organism Danio rerio
Release Date 3/2012

Sample Links

Run Details

Spots 15334813
Total Bases 1104106536
Total Bases 1104106536

Repository Details

SRA SRR392993
ENA SRR392993
BioProject PRJNA150397

Experiment Details

Title Ribosome protected fragments MZdicer 4hpf-2

Sample Details

Run Accession SRR392993
Total Number Of Spots (Original File)) 15334813
Total Number Of Bases (Original File) 1104106536
Average Read Length 72
Original File Size (Mb) 718
Experiment Id SRX113353
Library Name GSM854435: Ribosome protected fragments MZdicer 4hpf-2
Library Strategy RNA-Seq
Library Selection cDNA
Library Source TRANSCRIPTOMIC
Library Layout SINGLE
Insert Size 0
Insert Deviation 0
Platform ILLUMINA
Model Illumina Genome Analyzer II
Sra Project Accession (Srp) SRP010040
Pubmed Id 22422859
Sample SRS284297
Biosample SAMN00769041
Sample Type simple
Organism Taxid 7955
Organism Danio rerio
Sample Name GSM854435
Center Name GEO
Submission SRA048903
Month 3
Year 2012
Author Bazzini
Sample Source Whole embryo, MZdicer
Sample Title Ribosome protected fragments MZdicer 4hpf-2
Library-Type Ribo-Seq
Condition MZ
Timepoint 4h
Tissue Embryo
Stage 2hpf
Genotype wild typeTUAB
Run Accession Study Accession Scientific Name Description Cell Line Library Type Treatment Trips-Viz GWIPS-viz Reads BAM BigWig (F) BigWig (R)
SRR392993 Danio rerio Whole embryo, MZdicer Ribo-Seq
Run Accession Study Accession Scientific Name Description Cell Line Library Type Treatment Trips-Viz GWIPS-viz Reads BAM BigWig (F) BigWig (R)

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