SRR392994 (PRJNA150397)

Processing Status: Completed

General Details

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Sample Name GSM854436
Organism Danio rerio
Release Date 3/2012

Sample Links

Run Details

Spots 3844975
Total Bases 276838200
Total Bases 276838200

Repository Details

SRA SRR392994
ENA SRR392994
BioProject PRJNA150397

Experiment Details

Title Ribosome protected fragments MZdicer 6hpf

Sample Details

Run Accession SRR392994
Total Number Of Spots (Original File)) 3844975
Total Number Of Bases (Original File) 276838200
Average Read Length 72
Original File Size (Mb) 175
Experiment Id SRX113354
Library Name GSM854436: Ribosome protected fragments MZdicer 6hpf
Library Strategy RNA-Seq
Library Selection cDNA
Library Source TRANSCRIPTOMIC
Library Layout SINGLE
Insert Size 0
Insert Deviation 0
Platform ILLUMINA
Model Illumina Genome Analyzer II
Sra Project Accession (Srp) SRP010040
Pubmed Id 22422859
Sample SRS284298
Biosample SAMN00769042
Sample Type simple
Organism Taxid 7955
Organism Danio rerio
Sample Name GSM854436
Center Name GEO
Submission SRA048903
Month 3
Year 2012
Author Bazzini
Sample Source Whole embryo, MZdicer
Sample Title Ribosome protected fragments MZdicer 6hpf
Library-Type Ribo-Seq
Condition MZ
Timepoint 6h
Tissue Embryo
Stage 4hpf
Genotype wild typeTUAB
Run Accession Study Accession Scientific Name Description Cell Line Library Type Treatment Trips-Viz GWIPS-viz Reads BAM BigWig (F) BigWig (R)
SRR392994 Danio rerio Whole embryo, MZdicer Ribo-Seq
Run Accession Study Accession Scientific Name Description Cell Line Library Type Treatment Trips-Viz GWIPS-viz Reads BAM BigWig (F) BigWig (R)

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