SRR392997 (PRJNA150397)

Processing Status: Completed

General Details

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Sample Name GSM854437
Organism Danio rerio
Release Date 3/2012

Sample Links

Run Details

Spots 8965169
Total Bases 645492168
Total Bases 645492168

Repository Details

SRA SRR392997
ENA SRR392997
BioProject PRJNA150397

Experiment Details

Title Ribosome protected fragments MZdicer 6hpf-2

Sample Details

Run Accession SRR392997
Total Number Of Spots (Original File)) 8965169
Total Number Of Bases (Original File) 645492168
Average Read Length 72
Original File Size (Mb) 418
Experiment Id SRX113355
Library Name GSM854437: Ribosome protected fragments MZdicer 6hpf-2
Library Strategy RNA-Seq
Library Selection cDNA
Library Source TRANSCRIPTOMIC
Library Layout SINGLE
Insert Size 0
Insert Deviation 0
Platform ILLUMINA
Model Illumina Genome Analyzer II
Sra Project Accession (Srp) SRP010040
Pubmed Id 22422859
Sample SRS284299
Biosample SAMN00769043
Sample Type simple
Organism Taxid 7955
Organism Danio rerio
Sample Name GSM854437
Center Name GEO
Submission SRA048903
Month 3
Year 2012
Author Bazzini
Sample Source Whole embryo, MZdicer
Sample Title Ribosome protected fragments MZdicer 6hpf-2
Library-Type Ribo-Seq
Condition MZ
Timepoint 6h
Tissue Embryo
Stage 6hpf
Genotype wild typeTUAB
Run Accession Study Accession Scientific Name Description Cell Line Library Type Treatment Trips-Viz GWIPS-viz Reads BAM BigWig (F) BigWig (R)
SRR392997 Danio rerio Whole embryo, MZdicer Ribo-Seq
Run Accession Study Accession Scientific Name Description Cell Line Library Type Treatment Trips-Viz GWIPS-viz Reads BAM BigWig (F) BigWig (R)

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