SRR393002 (PRJNA150397)
Processing Status: Completed
General Details
Sample Name | GSM854440 |
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Organism | Danio rerio |
Release Date | 3/2012 |
Sample Links
GWIPS-viz | Trips-Viz | Custom Track |
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Visit Trips-Viz | Visit GWIPS-viz |
Run Details
Spots | 4037991 |
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Total Bases | 290735352 |
Total Bases | 290735352 |
Repository Details
SRA | SRR393002 |
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ENA | SRR393002 |
BioProject | PRJNA150397 |
Experiment Details
Title | Ribosome protected fragments Wild type 4hpf |
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Sample Details
Run Accession | SRR393002 |
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Total Number Of Spots (Original File)) | 4037991 |
Total Number Of Bases (Original File) | 290735352 |
Average Read Length | 72 |
Original File Size (Mb) | 195 |
Experiment Id | SRX113358 |
Library Name | GSM854440: Ribosome protected fragments Wild type 4hpf |
Library Strategy | RNA-Seq |
Library Selection | cDNA |
Library Source | TRANSCRIPTOMIC |
Library Layout | SINGLE |
Insert Size | 0 |
Insert Deviation | 0 |
Platform | ILLUMINA |
Model | Illumina Genome Analyzer II |
Sra Project Accession (Srp) | SRP010040 |
Pubmed Id | 22422859 |
Sample | SRS284302 |
Biosample | SAMN00769046 |
Sample Type | simple |
Organism Taxid | 7955 |
Organism | Danio rerio |
Sample Name | GSM854440 |
Center Name | GEO |
Submission | SRA048903 |
Month | 3 |
Year | 2012 |
Author | Bazzini |
Sample Source | Whole embryo, wild type |
Sample Title | Ribosome protected fragments Wild type 4hpf |
Library-Type | Ribo-Seq |
Condition | Wild Type |
Timepoint | 4h |
Tissue | Embryo |
Stage | 6hpf |
Genotype | MZdicer mutant |
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