SRR4436406 (PRJNA349752)
Processing Status: Failed
General Details
| Sample Name | GSM2357220 |
|---|---|
| Organism | Mus musculus |
| Release Date | 1/2017 |
Sample Links
| GWIPS-viz | Trips-Viz | Custom Track |
|---|---|---|
Run Details
| Spots | 61906329 |
|---|---|
| Total Bases | 4642974675 |
| Total Bases | 4642974675 |
Repository Details
| SRA | SRR4436406 |
|---|---|
| ENA | SRR4436406 |
| BioProject | PRJNA349752 |
Experiment Details
| Title | Nat1+/- B4 RPF rep2 |
|---|
Sample Details
| Run Accession | SRR4436406 |
|---|---|
| Total Number Of Spots (Original File)) | 61906329 |
| Total Number Of Bases (Original File) | 4642974675 |
| Average Read Length | 75 |
| Original File Size (Mb) | 1619 |
| Experiment Id | SRX2255518 |
| Library Strategy | OTHER |
| Library Selection | other |
| Library Source | TRANSCRIPTOMIC |
| Library Layout | SINGLE |
| Insert Size | 0 |
| Insert Deviation | 0 |
| Platform | ILLUMINA |
| Model | NextSeq 500 |
| Sra Project Accession (Srp) | SRP091889 |
| Pubmed Id | 28003464 |
| Sample | SRS1754954 |
| Biosample | SAMN05931411 |
| Sample Type | simple |
| Organism Taxid | 10090 |
| Organism | Mus musculus |
| Sample Name | GSM2357220 |
| Center Name | GEO |
| Submission | SRA486116 |
| Month | 1 |
| Year | 2017 |
| Author | Sugiyama |
| Sample Source | B4, Nat1 heterozygous mouse embryonic stem cell line, LIF, RPF |
| Sample Title | Nat1+/- B4 RPF rep2 |
| Library-Type | Ribo-Seq |
| Replicate-Number | 2.0 |
| Condition | Test |
| Cell-Line | mouse embryonic stem cell line |
| Genotype | Nat1 heterozygous |
| Run Accession | Study Accession | Scientific Name | Description | Cell Line | Library Type | Treatment | Trips-Viz | GWIPS-viz | Reads | BAM | BigWig (F) | BigWig (R) | |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| SRR4436406 | Mus musculus | B4, Nat1 heterozygous mouse embryonic stem cell line, LIF, RPF | mouse embryonic stem cell line | Ribo-Seq |  |
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| Run Accession | Study Accession | Scientific Name | Description | Cell Line | Library Type | Treatment | Trips-Viz | GWIPS-viz | Reads | BAM | BigWig (F) | BigWig (R) |
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