SRR449467 (PRJNA157105)

General Details

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Sample Name GSM904893
Organism Mus musculus
Release Date 5/2012

Sample Links

Run Details

Spots 14626320
Total Bases 511921200
Total Bases 511921200

Repository Details

SRA SRR449467
ENA SRR449467
BioProject PRJNA157105

Experiment Details

Title Footprint for vehicle-treated wild-type MEFs Replicate 1

Sample Details

Run Accession SRR449467
Total Number Of Spots (Original File)) 14626320
Total Number Of Bases (Original File) 511921200
Average Read Length 35
Original File Size (Mb) 292
Experiment Id SRX132041
Library Name GSM904893: Footprint for vehicle-treated wild-type MEFs Replicate 1
Library Strategy RNA-Seq
Library Selection cDNA
Library Source TRANSCRIPTOMIC
Library Layout SINGLE
Insert Size 0
Insert Deviation 0
Platform ILLUMINA
Model Illumina Genome Analyzer II
Sra Project Accession (Srp) SRP011987
Pubmed Id 22552098
Sample SRS306582
Biosample SAMN00847493
Sample Type simple
Organism Taxid 10090
Organism Mus musculus
Sample Name GSM904893
Center Name GEO
Submission SRA051335
Month 5
Year 2012
Author Thoreen
Sample Source Cell culture
Sample Title Footprint for vehicle-treated wild-type MEFs Replicate 1
Library-Type Ribo-Seq
Replicate-Number 1.0
Condition Wild Type
Tissue Embryo
Cell-Line embryonic fibroblast
Genotype 4EBP1/2 +/+ p53 -/-129/Svj1
Run Accession Study Accession Scientific Name Description Cell Line Library Type Treatment Trips-Viz GWIPS-viz Reads BAM BigWig (F) BigWig (R)
SRR449467 Mus musculus Cell culture embryonic fibroblast Ribo-Seq
Run Accession Study Accession Scientific Name Description Cell Line Library Type Treatment Trips-Viz GWIPS-viz Reads BAM BigWig (F) BigWig (R)

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