SRR449471 (PRJNA157105)

General Details

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Sample Name GSM904897
Organism Mus musculus
Release Date 5/2012

Sample Links

Run Details

Spots 23212758
Total Bases 812446530
Total Bases 812446530

Repository Details

SRA SRR449471
ENA SRR449471
BioProject PRJNA157105

Experiment Details

Title Footprint for vehicle-treated 4EBP1/2 KO MEFs Replicate 1

Sample Details

Run Accession SRR449471
Total Number Of Spots (Original File)) 23212758
Total Number Of Bases (Original File) 812446530
Average Read Length 35
Original File Size (Mb) 383
Experiment Id SRX132045
Library Name GSM904897: Footprint for vehicle-treated 4EBP1/2 KO MEFs Replicate 1
Library Strategy RNA-Seq
Library Selection cDNA
Library Source TRANSCRIPTOMIC
Library Layout SINGLE
Insert Size 0
Insert Deviation 0
Platform ILLUMINA
Model Illumina Genome Analyzer II
Sra Project Accession (Srp) SRP011987
Pubmed Id 22552098
Sample SRS306586
Biosample SAMN00847497
Sample Type simple
Organism Taxid 10090
Organism Mus musculus
Sample Name GSM904897
Center Name GEO
Submission SRA051335
Month 5
Year 2012
Author Thoreen
Sample Source Cell culture
Sample Title Footprint for vehicle-treated 4EBP1/2 KO MEFs Replicate 1
Library-Type Ribo-Seq
Replicate-Number 1.0
Condition KO
Tissue Embryo
Cell-Line embryonic fibroblast
Genotype 4EBP1/2 -/- p53 -/-129/Svj1
Run Accession Study Accession Scientific Name Description Cell Line Library Type Treatment Trips-Viz GWIPS-viz Reads BAM BigWig (F) BigWig (R)
SRR449471 Mus musculus Cell culture embryonic fibroblast Ribo-Seq
Run Accession Study Accession Scientific Name Description Cell Line Library Type Treatment Trips-Viz GWIPS-viz Reads BAM BigWig (F) BigWig (R)

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