SRR5223059 (PRJNA369542)

Processing Status: Completed

General Details

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Sample Name GSM2474469
Organism Mus musculus
Release Date 2/2017

Sample Links

Run Details

Spots 41729373
Total Bases 2086468650
Total Bases 2086468650

Repository Details

SRA SRR5223059
ENA SRR5223059
BioProject PRJNA369542

Experiment Details

Title primary epidermis Pelota knockout Ribo-Prof replicate 1

Sample Details

Run Accession SRR5223059
Total Number Of Spots (Original File)) 41729373
Total Number Of Bases (Original File) 2086468650
Average Read Length 50
Original File Size (Mb) 1048
Experiment Id SRX2532236
Library Strategy OTHER
Library Selection other
Library Source TRANSCRIPTOMIC
Library Layout SINGLE
Insert Size 0
Insert Deviation 0
Platform ILLUMINA
Model Illumina HiSeq 2000
Sra Project Accession (Srp) SRP098700
Pubmed Id 29643507
Sample SRS1952996
Biosample SAMN06288373
Sample Type simple
Organism Taxid 10090
Organism Mus musculus
Sample Name GSM2474469
Center Name GEO
Submission SRA535017
Month 2
Year 2017
Author Liakath-Ali
Sample Source epidermis
Sample Title primary epidermis Pelota knockout Ribo-Prof replicate 1
Library-Type Ribo-Seq
Replicate-Number 1.0
Condition KO
Inhibitor Cycloheximide
Tissue primary cell type
Mode Of Rrna Depletion RiboZero-Gold rRNA depletion
Run Accession Study Accession Scientific Name Description Cell Line Library Type Treatment Trips-Viz GWIPS-viz Reads BAM BigWig (F) BigWig (R)
SRR5223059 Mus musculus epidermis Ribo-Seq Cycloheximide
Run Accession Study Accession Scientific Name Description Cell Line Library Type Treatment Trips-Viz GWIPS-viz Reads BAM BigWig (F) BigWig (R)

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