SRR5223059 (PRJNA369542)
General Details
| Sample Name | GSM2474469 |
|---|---|
| Organism | Mus musculus |
| Release Date | 2/2017 |
Sample Links
| GWIPS-viz | Trips-Viz | Custom Track |
|---|---|---|
| View Custom Track |
Run Details
| Spots | 41729373 |
|---|---|
| Total Bases | 2086468650 |
| Total Bases | 2086468650 |
Repository Details
| SRA | SRR5223059 |
|---|---|
| ENA | SRR5223059 |
| BioProject | PRJNA369542 |
Experiment Details
| Title | primary epidermis Pelota knockout Ribo-Prof replicate 1 |
|---|
Sample Details
| Run Accession | SRR5223059 |
|---|---|
| Total Number Of Spots (Original File)) | 41729373 |
| Total Number Of Bases (Original File) | 2086468650 |
| Average Read Length | 50 |
| Original File Size (Mb) | 1048 |
| Experiment Id | SRX2532236 |
| Library Strategy | OTHER |
| Library Selection | other |
| Library Source | TRANSCRIPTOMIC |
| Library Layout | SINGLE |
| Insert Size | 0 |
| Insert Deviation | 0 |
| Platform | ILLUMINA |
| Model | Illumina HiSeq 2000 |
| Sra Project Accession (Srp) | SRP098700 |
| Pubmed Id | 29643507 |
| Sample | SRS1952996 |
| Biosample | SAMN06288373 |
| Sample Type | simple |
| Organism Taxid | 10090 |
| Organism | Mus musculus |
| Sample Name | GSM2474469 |
| Center Name | GEO |
| Submission | SRA535017 |
| Month | 2 |
| Year | 2017 |
| Author | Liakath-Ali |
| Sample Source | epidermis |
| Sample Title | primary epidermis Pelota knockout Ribo-Prof replicate 1 |
| Library-Type | Ribo-Seq |
| Replicate-Number | 1.0 |
| Condition | KO |
| Inhibitor | Cycloheximide |
| Tissue | primary cell type |
| Mode Of Rrna Depletion | RiboZero-Gold rRNA depletion |
| Run Accession | Study Accession | Scientific Name | Description | Cell Line | Library Type | Treatment | Trips-Viz | GWIPS-viz | Reads | BAM | BigWig (F) | BigWig (R) | |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| SRR5223059 | Mus musculus | epidermis | Ribo-Seq | Cycloheximide |  |
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| Run Accession | Study Accession | Scientific Name | Description | Cell Line | Library Type | Treatment | Trips-Viz | GWIPS-viz | Reads | BAM | BigWig (F) | BigWig (R) |
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