SRR5223060 (PRJNA369542)

Processing Status: Completed

General Details

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Sample Name GSM2474470
Organism Mus musculus
Release Date 2/2017

Sample Links

Run Details

Spots 41162333
Total Bases 2058116650
Total Bases 2058116650

Repository Details

SRA SRR5223060
ENA SRR5223060
BioProject PRJNA369542

Experiment Details

Title primary epidermis Pelota knockout Ribo-Prof replicate 2

Sample Details

Run Accession SRR5223060
Total Number Of Spots (Original File)) 41162333
Total Number Of Bases (Original File) 2058116650
Average Read Length None
Original File Size (Mb) 1031
Experiment Id SRX2532237
Library Strategy OTHER
Library Selection other
Library Source TRANSCRIPTOMIC
Library Layout SINGLE
Insert Size 0
Insert Deviation 0
Platform ILLUMINA
Model Illumina HiSeq 2000
Sra Project Accession (Srp) SRP098700
Pubmed Id 29643507
Sample SRS1952997
Biosample SAMN06288372
Sample Type simple
Organism Taxid 10090
Organism Mus musculus
Sample Name GSM2474470
Center Name GEO
Submission SRA535017
Month 2
Year 2017
Author Liakath-Ali
Sample Source epidermis
Sample Title primary epidermis Pelota knockout Ribo-Prof replicate 2
Library-Type Ribo-Seq
Replicate-Number 2.0
Condition KO
Inhibitor Cycloheximide
Tissue primary cell type
Mode Of Rrna Depletion RiboZero-Gold rRNA depletion
Run Accession Study Accession Scientific Name Description Cell Line Library Type Treatment Trips-Viz GWIPS-viz Reads BAM BigWig (F) BigWig (R)
SRR5223060 Mus musculus epidermis Ribo-Seq Cycloheximide
Run Accession Study Accession Scientific Name Description Cell Line Library Type Treatment Trips-Viz GWIPS-viz Reads BAM BigWig (F) BigWig (R)

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