SRR525274 (PRJNA171135)

Processing Status: Completed

General Details

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Sample Name GSM971689
Organism Homo sapiens
Release Date 7/2015

Sample Links

Run Details

Spots 101960552
Total Bases 5098027600
Total Bases 5098027600

Repository Details

SRA SRR525274
ENA SRR525274
BioProject PRJNA171135

Experiment Details

Title THP-1_cyclo_rep#2

Sample Details

Run Accession SRR525274
Total Number Of Spots (Original File)) 101960552
Total Number Of Bases (Original File) 5098027600
Average Read Length 50
Original File Size (Mb) 3143
Experiment Id SRX170359
Library Name GSM971689: THP-1_cyclo_rep#2
Library Strategy RNA-Seq
Library Selection cDNA
Library Source TRANSCRIPTOMIC
Library Layout SINGLE
Insert Size 0
Insert Deviation 0
Platform ILLUMINA
Model Illumina Genome Analyzer II
Sra Project Accession (Srp) SRP014542
Pubmed Id 22879431
Sample SRS351514
Biosample SAMN01091984
Sample Type simple
Organism Taxid 9606
Organism Homo sapiens
Sample Name GSM971689
Center Name GEO
Submission SRA056300
Month 7
Year 2015
Author Fritsch
Sample Source human monocyte cell line
Sample Title THP-1_cyclo_rep#2
Library-Type 0.0
Replicate-Number 0.0
Condition Test
Inhibitor Cycloheximide
Timepoint NANA
Tissue Blood
Cell-Line THP1
Cellular-Compartment 0.0
Stage 0.0
Gene 0.0
Sex 0.0
Strain 0.0
Age 0.0
Infected 0.0
Disease 0.0
Genotype 0.0
Feeding 0.0
Temperature 0.0
Sirna 0.0
Sgrna 0.0
Shrna 0.0
Plasmid 0.0
Growth-Condition 0.0
Stress 0.0
Cancer 0.0
Microrna 0.0
Individual 0.0
Antibody Used 0.0
Ethnicity 0.0
Dose 0.0
Stimulation 0.0
Host Organism 0.0
Unique Molecular Identifier (Umi) 0.0
Adapter Sequence 0.0
Mode Of Separation 0.0
Mode Of Rrna Depletion 0.0
Barcode Information 0.0
Nucelase Used 0.0
Kit Used 0.0
Run Accession Study Accession Scientific Name Description Cell Line Library Type Treatment Trips-Viz GWIPS-viz Reads BAM BigWig (F) BigWig (R)
SRR525274 Homo sapiens human monocyte cell line THP1 0.0 Cycloheximide
Run Accession Study Accession Scientific Name Description Cell Line Library Type Treatment Trips-Viz GWIPS-viz Reads BAM BigWig (F) BigWig (R)

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