SRR525274 (PRJNA171135)
Processing Status: Completed
General Details
Sample Name | GSM971689 |
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Organism | Homo sapiens |
Release Date | 7/2015 |
Sample Links
GWIPS-viz | Trips-Viz | Custom Track |
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Run Details
Spots | 101960552 |
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Total Bases | 5098027600 |
Total Bases | 5098027600 |
Repository Details
SRA | SRR525274 |
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ENA | SRR525274 |
BioProject | PRJNA171135 |
Experiment Details
Title | THP-1_cyclo_rep#2 |
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Sample Details
Run Accession | SRR525274 |
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Total Number Of Spots (Original File)) | 101960552 |
Total Number Of Bases (Original File) | 5098027600 |
Average Read Length | 50 |
Original File Size (Mb) | 3143 |
Experiment Id | SRX170359 |
Library Name | GSM971689: THP-1_cyclo_rep#2 |
Library Strategy | RNA-Seq |
Library Selection | cDNA |
Library Source | TRANSCRIPTOMIC |
Library Layout | SINGLE |
Insert Size | 0 |
Insert Deviation | 0 |
Platform | ILLUMINA |
Model | Illumina Genome Analyzer II |
Sra Project Accession (Srp) | SRP014542 |
Pubmed Id | 22879431 |
Sample | SRS351514 |
Biosample | SAMN01091984 |
Sample Type | simple |
Organism Taxid | 9606 |
Organism | Homo sapiens |
Sample Name | GSM971689 |
Center Name | GEO |
Submission | SRA056300 |
Month | 7 |
Year | 2015 |
Author | Fritsch |
Sample Source | human monocyte cell line |
Sample Title | THP-1_cyclo_rep#2 |
Library-Type | 0.0 |
Replicate-Number | 0.0 |
Condition | Test |
Inhibitor | Cycloheximide |
Timepoint | NANA |
Tissue | Blood |
Cell-Line | THP1 |
Cellular-Compartment | 0.0 |
Stage | 0.0 |
Gene | 0.0 |
Sex | 0.0 |
Strain | 0.0 |
Age | 0.0 |
Infected | 0.0 |
Disease | 0.0 |
Genotype | 0.0 |
Feeding | 0.0 |
Temperature | 0.0 |
Sirna | 0.0 |
Sgrna | 0.0 |
Shrna | 0.0 |
Plasmid | 0.0 |
Growth-Condition | 0.0 |
Stress | 0.0 |
Cancer | 0.0 |
Microrna | 0.0 |
Individual | 0.0 |
Antibody Used | 0.0 |
Ethnicity | 0.0 |
Dose | 0.0 |
Stimulation | 0.0 |
Host Organism | 0.0 |
Unique Molecular Identifier (Umi) | 0.0 |
Adapter Sequence | 0.0 |
Mode Of Separation | 0.0 |
Mode Of Rrna Depletion | 0.0 |
Barcode Information | 0.0 |
Nucelase Used | 0.0 |
Kit Used | 0.0 |
Run Accession | Study Accession | Scientific Name | Description | Cell Line | Library Type | Treatment | Trips-Viz | GWIPS-viz | Reads | BAM | BigWig (F) | BigWig (R) | |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|
SRR525274 | Homo sapiens | human monocyte cell line | THP1 | 0.0 | Cycloheximide | ||||||||
Run Accession | Study Accession | Scientific Name | Description | Cell Line | Library Type | Treatment | Trips-Viz | GWIPS-viz | Reads | BAM | BigWig (F) | BigWig (R) |
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