SRR533666 (PRJNA172014)
Processing Status: Completed
General Details
| Sample Name | GSM981232 |
|---|---|
| Organism | Mus musculus |
| Release Date | 7/2015 |
Sample Links
| GWIPS-viz | Trips-Viz | Custom Track |
|---|---|---|
Run Details
| Spots | 85431283 |
|---|---|
| Total Bases | 3075526188 |
| Total Bases | 3075526188 |
Repository Details
| SRA | SRR533666 |
|---|---|
| ENA | SRR533666 |
| BioProject | PRJNA172014 |
Experiment Details
| Title | C2C12ribo-shMbnl1 |
|---|
Sample Details
| Run Accession | SRR533666 |
|---|---|
| Total Number Of Spots (Original File)) | 85431283 |
| Total Number Of Bases (Original File) | 3075526188 |
| Average Read Length | 36 |
| Original File Size (Mb) | 1947 |
| Experiment Id | SRX174067 |
| Library Name | GSM981232: C2C12ribo-shMbnl1 |
| Library Strategy | RNA-Seq |
| Library Selection | cDNA |
| Library Source | TRANSCRIPTOMIC |
| Library Layout | SINGLE |
| Insert Size | 0 |
| Insert Deviation | 0 |
| Platform | ILLUMINA |
| Model | Illumina Genome Analyzer IIx |
| Sra Project Accession (Srp) | SRP014709 |
| Pubmed Id | 22901804 |
| Sample | SRS353265 |
| Biosample | SAMN01103344 |
| Sample Type | simple |
| Organism Taxid | 10090 |
| Organism | Mus musculus |
| Sample Name | GSM981232 |
| Center Name | GEO |
| Submission | SRA056973 |
| Month | 7 |
| Year | 2015 |
| Author | Wang |
| Sample Source | C2C12 mouse myoblast, Mbnl1 depleted, ribosomal fraction |
| Sample Title | C2C12ribo-shMbnl1 |
| Condition | KO |
| Tissue | Brain |
| Strain | 129/SvJ |
| Age | 16 weeks |
| Genotype | Mbnl1 knockout |
| Run Accession | Study Accession | Scientific Name | Description | Cell Line | Library Type | Treatment | Trips-Viz | GWIPS-viz | Reads | BAM | BigWig (F) | BigWig (R) | |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| SRR533666 | Mus musculus | C2C12 mouse myoblast, Mbnl1 depleted, ribosomal fraction |  |
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| Run Accession | Study Accession | Scientific Name | Description | Cell Line | Library Type | Treatment | Trips-Viz | GWIPS-viz | Reads | BAM | BigWig (F) | BigWig (R) |
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