SRR5382420 (PRJNA380795)
Processing Status: Completed
General Details
| Sample Name | GSM2552191 |
|---|---|
| Organism | Homo sapiens |
| Release Date | 5/2017 |
Sample Links
| GWIPS-viz | Trips-Viz | Custom Track |
|---|---|---|
| Visit Trips-Viz | Visit GWIPS-viz |
Run Details
| Spots | 16584922 |
|---|---|
| Total Bases | 526400685 |
| Total Bases | 526400685 |
Repository Details
| SRA | SRR5382420 |
|---|---|
| ENA | SRR5382420 |
| BioProject | PRJNA380795 |
Experiment Details
| Title | KO1_RPF |
|---|
Sample Details
| Run Accession | SRR5382420 |
|---|---|
| Total Number Of Spots (Original File)) | 16584922 |
| Total Number Of Bases (Original File) | 526400685 |
| Average Read Length | 31 |
| Original File Size (Mb) | 357 |
| Experiment Id | SRX2677571 |
| Library Strategy | OTHER |
| Library Selection | other |
| Library Source | TRANSCRIPTOMIC |
| Library Layout | SINGLE |
| Insert Size | 0 |
| Insert Deviation | 0 |
| Platform | ILLUMINA |
| Model | Illumina HiScanSQ |
| Sra Project Accession (Srp) | SRP102616 |
| Pubmed Id | 28520920 |
| Sample | SRS2075704 |
| Biosample | SAMN06648042 |
| Sample Type | simple |
| Organism Taxid | 9606 |
| Organism | Homo sapiens |
| Sample Name | GSM2552191 |
| Center Name | GEO |
| Submission | SRA549841 |
| Month | 5 |
| Year | 2017 |
| Author | Jakobsson |
| Sample Source | HAP-1 EEF1AKMT4_ribosomal profiling |
| Sample Title | KO1_RPF |
| Library-Type | Ribo-Seq |
| Condition | Test |
| Inhibitor | Cycloheximide |
| Cell-Line | HAP-1 |
| Genotype | EEF1AKMT4 KO |
| Run Accession | Study Accession | Scientific Name | Description | Cell Line | Library Type | Treatment | Trips-Viz | GWIPS-viz | Reads | BAM | BigWig (F) | BigWig (R) | |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| SRR5382420 | Homo sapiens | HAP-1 EEF1AKMT4_ribosomal profiling | HAP-1 | Ribo-Seq | Cycloheximide |  |
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| Run Accession | Study Accession | Scientific Name | Description | Cell Line | Library Type | Treatment | Trips-Viz | GWIPS-viz | Reads | BAM | BigWig (F) | BigWig (R) |
ⓘ For more Information on the columns shown here see: About