SRR5640840 (PRJNA388919)
Processing Status: Completed
General Details
| Sample Name | GSM2648082 |
|---|---|
| Organism | Mus musculus |
| Release Date | 2/2018 |
Sample Links
| GWIPS-viz | Trips-Viz | Custom Track |
|---|---|---|
Run Details
| Spots | 107218164 |
|---|---|
| Total Bases | 5360908200 |
| Total Bases | 5360908200 |
Repository Details
| SRA | SRR5640840 |
|---|---|
| ENA | SRR5640840 |
| BioProject | PRJNA388919 |
Experiment Details
| Title | Ribosome_profiling_muscle_Leu1 |
|---|
Sample Details
| Run Accession | SRR5640840 |
|---|---|
| Total Number Of Spots (Original File)) | 107218164 |
| Total Number Of Bases (Original File) | 5360908200 |
| Average Read Length | 50 |
| Original File Size (Mb) | 2234 |
| Experiment Id | SRX2879239 |
| Library Strategy | OTHER |
| Library Selection | other |
| Library Source | TRANSCRIPTOMIC |
| Library Layout | SINGLE |
| Insert Size | 0 |
| Insert Deviation | 0 |
| Platform | ILLUMINA |
| Model | Illumina HiSeq 2000 |
| Sra Project Accession (Srp) | SRP108547 |
| Pubmed Id | 28615380 |
| Sample | SRS2250561 |
| Biosample | SAMN07189040 |
| Sample Type | simple |
| Organism Taxid | 10090 |
| Organism | Mus musculus |
| Sample Name | GSM2648082 |
| Center Name | GEO |
| Submission | SRA569486 |
| Month | 2 |
| Year | 2018 |
| Author | Drummond |
| Sample Source | Quadriceps muscle, leucine |
| Sample Title | Ribosome_profiling_muscle_Leu1 |
| Library-Type | Ribo-Seq |
| Condition | Test |
| Tissue | Muscle |
| Cell-Line | C57Bl/6 |
| Strain | C57Bl/6 |
| Feeding | Oral gavage leucine |
| Run Accession | Study Accession | Scientific Name | Description | Cell Line | Library Type | Treatment | Trips-Viz | GWIPS-viz | Reads | BAM | BigWig (F) | BigWig (R) | |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| SRR5640840 | Mus musculus | Quadriceps muscle, leucine | C57Bl/6 | Ribo-Seq |  |
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| Run Accession | Study Accession | Scientific Name | Description | Cell Line | Library Type | Treatment | Trips-Viz | GWIPS-viz | Reads | BAM | BigWig (F) | BigWig (R) |
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