SRR5742254 (PRJNA391480)
Processing Status: Completed
General Details
| Sample Name | GSM2679700 |
|---|---|
| Organism | Escherichia coli |
| Release Date | 4/2018 |
Sample Links
| GWIPS-viz | Trips-Viz | Custom Track |
|---|---|---|
Run Details
| Spots | 33925489 |
|---|---|
| Total Bases | 1730199939 |
| Total Bases | 1730199939 |
Repository Details
| SRA | SRR5742254 |
|---|---|
| ENA | SRR5742254 |
| BioProject | PRJNA391480 |
Experiment Details
| Title | Hfq mut exp RPF |
|---|
Sample Details
| Run Accession | SRR5742254 |
|---|---|
| Total Number Of Spots (Original File)) | 33925489 |
| Total Number Of Bases (Original File) | 1730199939 |
| Average Read Length | 51 |
| Original File Size (Mb) | 1046 |
| Experiment Id | SRX2947196 |
| Library Strategy | RNA-Seq |
| Library Selection | cDNA |
| Library Source | TRANSCRIPTOMIC |
| Library Layout | SINGLE |
| Insert Size | 0 |
| Insert Deviation | 0 |
| Platform | ILLUMINA |
| Model | Illumina HiSeq 2000 |
| Sra Project Accession (Srp) | SRP110169 |
| Pubmed Id | 29669858 |
| Sample | SRS2306466 |
| Biosample | SAMN07269357 |
| Sample Type | simple |
| Organism Taxid | 562 |
| Organism | Escherichia coli |
| Sample Name | GSM2679700 |
| Center Name | GEO |
| Submission | SRA579627 |
| Month | 4 |
| Year | 2018 |
| Author | Andrade |
| Sample Source | E. coli CMA540(MG1693 ∆hfq::cat) |
| Sample Title | Hfq mut exp RPF |
| Library-Type | Ribo-Seq |
| Stage | Exponential |
| Strain | CMA540(MG1693 delta_hfq::cat) |
| Run Accession | Study Accession | Scientific Name | Description | Cell Line | Library Type | Treatment | Trips-Viz | GWIPS-viz | Reads | BAM | BigWig (F) | BigWig (R) | |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| SRR5742254 | Escherichia coli | E. coli CMA540(MG1693 ∆hfq::cat) | Ribo-Seq |  |
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| Run Accession | Study Accession | Scientific Name | Description | Cell Line | Library Type | Treatment | Trips-Viz | GWIPS-viz | Reads | BAM | BigWig (F) | BigWig (R) |
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