SRR5892474 (PRJNA397035)

Processing Status: Completed

General Details

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Sample Name GSM2730476
Organism Oryza sativa
Release Date 11/2018

Sample Links

Run Details

Spots 144690174
Total Bases 14469017400
Total Bases 14469017400

Repository Details

SRA SRR5892474
ENA SRR5892474
BioProject PRJNA397035

Experiment Details

Title C10m_rice_22oC_10min_riboseq_rep2.fastq.gz

Sample Details

Run Accession SRR5892474
Total Number Of Spots (Original File)) 144690174
Total Number Of Bases (Original File) 14469017400
Average Read Length 100
Original File Size (Mb) 6465
Experiment Id SRX3058169
Library Strategy OTHER
Library Selection other
Library Source TRANSCRIPTOMIC
Library Layout SINGLE
Insert Size 0
Insert Deviation 0
Platform ILLUMINA
Model Illumina HiSeq 2500
Sra Project Accession (Srp) SRP114761
Pubmed Id 30413617
Sample SRS2404132
Biosample SAMN07446468
Sample Type simple
Organism Taxid 4530
Organism Oryza sativa
Sample Name GSM2730476
Center Name GEO
Submission SRA596164
Month 11
Year 2018
Author Su
Sample Source Shoot
Sample Title C10m_rice_22oC_10min_riboseq_rep2.fastq.gz
Library-Type Ribo-Seq
Replicate-Number 2.0
Tissue Shoot
Age two-week-old
Temperature 22 C for 10 min
Run Accession Study Accession Scientific Name Description Cell Line Library Type Treatment Trips-Viz GWIPS-viz Reads BAM BigWig (F) BigWig (R)
SRR5892474 Oryza sativa Shoot Ribo-Seq
Run Accession Study Accession Scientific Name Description Cell Line Library Type Treatment Trips-Viz GWIPS-viz Reads BAM BigWig (F) BigWig (R)

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