SRR5892475 (PRJNA397035)

Processing Status: Completed

General Details

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Sample Name GSM2730477
Organism Oryza sativa
Release Date 11/2018

Sample Links

Run Details

Spots 142674937
Total Bases 14267493700
Total Bases 14267493700

Repository Details

SRA SRR5892475
ENA SRR5892475
BioProject PRJNA397035

Experiment Details

Title H10m_rice_42oC_10min_riboseq_rep1.fastq.gz

Sample Details

Run Accession SRR5892475
Total Number Of Spots (Original File)) 142674937
Total Number Of Bases (Original File) 14267493700
Average Read Length 100
Original File Size (Mb) 6394
Experiment Id SRX3058170
Library Strategy OTHER
Library Selection other
Library Source TRANSCRIPTOMIC
Library Layout SINGLE
Insert Size 0
Insert Deviation 0
Platform ILLUMINA
Model Illumina HiSeq 2500
Sra Project Accession (Srp) SRP114761
Pubmed Id 30413617
Sample SRS2404130
Biosample SAMN07446467
Sample Type simple
Organism Taxid 4530
Organism Oryza sativa
Sample Name GSM2730477
Center Name GEO
Submission SRA596164
Month 11
Year 2018
Author Su
Sample Source Shoot
Sample Title H10m_rice_42oC_10min_riboseq_rep1.fastq.gz
Library-Type Ribo-Seq
Replicate-Number 1.0
Tissue Shoot
Age two-week-old
Temperature 42 C for 10 min
Run Accession Study Accession Scientific Name Description Cell Line Library Type Treatment Trips-Viz GWIPS-viz Reads BAM BigWig (F) BigWig (R)
SRR5892475 Oryza sativa Shoot Ribo-Seq
Run Accession Study Accession Scientific Name Description Cell Line Library Type Treatment Trips-Viz GWIPS-viz Reads BAM BigWig (F) BigWig (R)

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