SRR5892476 (PRJNA397035)

Processing Status: Completed

General Details

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Sample Name GSM2730478
Organism Oryza sativa
Release Date 11/2018

Sample Links

Run Details

Spots 140143588
Total Bases 14014358800
Total Bases 14014358800

Repository Details

SRA SRR5892476
ENA SRR5892476
BioProject PRJNA397035

Experiment Details

Title H10m_rice_42oC_10min_riboseq_rep2.fastq.gz

Sample Details

Run Accession SRR5892476
Total Number Of Spots (Original File)) 140143588
Total Number Of Bases (Original File) 14014358800
Average Read Length 100
Original File Size (Mb) 6174
Experiment Id SRX3058171
Library Strategy OTHER
Library Selection other
Library Source TRANSCRIPTOMIC
Library Layout SINGLE
Insert Size 0
Insert Deviation 0
Platform ILLUMINA
Model Illumina HiSeq 2500
Sra Project Accession (Srp) SRP114761
Pubmed Id 30413617
Sample SRS2404131
Biosample SAMN07446466
Sample Type simple
Organism Taxid 4530
Organism Oryza sativa
Sample Name GSM2730478
Center Name GEO
Submission SRA596164
Month 11
Year 2018
Author Su
Sample Source Shoot
Sample Title H10m_rice_42oC_10min_riboseq_rep2.fastq.gz
Library-Type Ribo-Seq
Replicate-Number 2.0
Tissue Shoot
Age two-week-old
Temperature 42 C for 10 min
Run Accession Study Accession Scientific Name Description Cell Line Library Type Treatment Trips-Viz GWIPS-viz Reads BAM BigWig (F) BigWig (R)
SRR5892476 Oryza sativa Shoot Ribo-Seq
Run Accession Study Accession Scientific Name Description Cell Line Library Type Treatment Trips-Viz GWIPS-viz Reads BAM BigWig (F) BigWig (R)

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