SRR592954 (PRJNA177721)

Processing Status: Failed

General Details

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Sample Name GSM1020235
Organism Human betaherpesvirus 5
Release Date 7/2015

Sample Links

Run Details

Spots 23192119
Total Bases 927684760
Total Bases 927684760

Repository Details

SRA SRR592954
ENA SRR592954
BioProject PRJNA177721

Experiment Details

Title Footprints from cells infected with HCMV for 24hr, pretreated with cycloheximide

Sample Details

Run Accession SRR592954
Total Number Of Spots (Original File)) 23192119
Total Number Of Bases (Original File) 927684760
Average Read Length 40
Original File Size (Mb) 561
Experiment Id SRX195689
Library Strategy RNA-Seq
Library Selection cDNA
Library Source TRANSCRIPTOMIC
Library Layout SINGLE
Insert Size 0
Insert Deviation 0
Platform ILLUMINA
Model Illumina Genome Analyzer II
Sra Project Accession (Srp) SRP016143
Pubmed Id 23180859
Sample SRS369468
Biosample SAMN01766540
Sample Type simple
Organism Taxid 10359
Organism Human betaherpesvirus 5
Sample Name GSM1020235
Center Name GEO
Submission SRA059587
Month 7
Year 2015
Author Stern-Ginossar
Sample Source Human fibroblasts infected with HCMV, cycloheximide, 24hr
Sample Title Footprints from cells infected with HCMV for 24hr, pretreated with cycloheximide
Library-Type Ribo-Seq
Inhibitor Cycloheximide
Timepoint 24hr
Tissue Skin
Cell-Line Fibroblast
Strain Merlin
Run Accession Study Accession Scientific Name Description Cell Line Library Type Treatment Trips-Viz GWIPS-viz Reads BAM BigWig (F) BigWig (R)
SRR592954 Human betaherpesvirus 5 Human fibroblasts infected with HCMV, cycloheximide, 24hr Fibroblast Ribo-Seq Cycloheximide
Run Accession Study Accession Scientific Name Description Cell Line Library Type Treatment Trips-Viz GWIPS-viz Reads BAM BigWig (F) BigWig (R)

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