SRR592956 (PRJNA177721)

Processing Status: Failed

General Details

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Sample Name GSM1020237
Organism Human betaherpesvirus 5
Release Date 7/2015

Sample Links

Run Details

Spots 31785837
Total Bases 1589291850
Total Bases 1589291850

Repository Details

SRA SRR592956
ENA SRR592956
BioProject PRJNA177721

Experiment Details

Title Footprints from cells infected with HCMV for 72hr, pretreated with cycloheximide, replicate

Sample Details

Run Accession SRR592956
Total Number Of Spots (Original File)) 31785837
Total Number Of Bases (Original File) 1589291850
Average Read Length 50
Original File Size (Mb) 1073
Experiment Id SRX195691
Library Strategy RNA-Seq
Library Selection cDNA
Library Source TRANSCRIPTOMIC
Library Layout SINGLE
Insert Size 0
Insert Deviation 0
Platform ILLUMINA
Model Illumina HiSeq 2000
Sra Project Accession (Srp) SRP016143
Pubmed Id 23180859
Sample SRS369470
Biosample SAMN01766542
Sample Type simple
Organism Taxid 10359
Organism Human betaherpesvirus 5
Sample Name GSM1020237
Center Name GEO
Submission SRA059587
Month 7
Year 2015
Author Stern-Ginossar
Sample Source Human fibroblasts infected with HCMV, cycloheximide, 72hr
Sample Title Footprints from cells infected with HCMV for 72hr, pretreated with cycloheximide, replicate
Library-Type Ribo-Seq
Inhibitor Cycloheximide
Timepoint 72hr
Tissue Skin
Cell-Line Fibroblast
Strain Merlin
Run Accession Study Accession Scientific Name Description Cell Line Library Type Treatment Trips-Viz GWIPS-viz Reads BAM BigWig (F) BigWig (R)
SRR592956 Human betaherpesvirus 5 Human fibroblasts infected with HCMV, cycloheximide, 72hr Fibroblast Ribo-Seq Cycloheximide
Run Accession Study Accession Scientific Name Description Cell Line Library Type Treatment Trips-Viz GWIPS-viz Reads BAM BigWig (F) BigWig (R)

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