SRR592958 (PRJNA177721)

Processing Status: Failed

General Details

View quality reports

Sample Name GSM1020239
Organism Human betaherpesvirus 5
Release Date 7/2015

Sample Links

Run Details

Spots 26145020
Total Bases 1045800800
Total Bases 1045800800

Repository Details

SRA SRR592958
ENA SRR592958
BioProject PRJNA177721

Experiment Details

Title Footprints from cells infected with HCMV for 72hr, pretreated with Harringtonine

Sample Details

Run Accession SRR592958
Total Number Of Spots (Original File)) 26145020
Total Number Of Bases (Original File) 1045800800
Average Read Length 40
Original File Size (Mb) 674
Experiment Id SRX195693
Library Strategy RNA-Seq
Library Selection cDNA
Library Source TRANSCRIPTOMIC
Library Layout SINGLE
Insert Size 0
Insert Deviation 0
Platform ILLUMINA
Model Illumina Genome Analyzer II
Sra Project Accession (Srp) SRP016143
Pubmed Id 23180859
Sample SRS369472
Biosample SAMN01766544
Sample Type simple
Organism Taxid 10359
Organism Human betaherpesvirus 5
Sample Name GSM1020239
Center Name GEO
Submission SRA059587
Month 7
Year 2015
Author Stern-Ginossar
Sample Source Human fibroblasts infected with HCMV, Harringtonine, 72hr
Sample Title Footprints from cells infected with HCMV for 72hr, pretreated with Harringtonine
Library-Type Ribo-Seq
Inhibitor Harringtonine
Timepoint 72hr
Tissue Skin
Cell-Line Fibroblast
Strain Merlin
Run Accession Study Accession Scientific Name Description Cell Line Library Type Treatment Trips-Viz GWIPS-viz Reads BAM BigWig (F) BigWig (R)
SRR592958 Human betaherpesvirus 5 Human fibroblasts infected with HCMV, Harringtonine, 72hr Fibroblast Ribo-Seq Harringtonine
Run Accession Study Accession Scientific Name Description Cell Line Library Type Treatment Trips-Viz GWIPS-viz Reads BAM BigWig (F) BigWig (R)

ⓘ For more Information on the columns shown here see: About