SRR592960 (PRJNA177721)

Processing Status: Failed

General Details

View quality reports

Sample Name GSM1020241
Organism Human betaherpesvirus 5
Release Date 7/2015

Sample Links

Run Details

Spots 46160824
Total Bases 2308041200
Total Bases 2308041200

Repository Details

SRA SRR592960
ENA SRR592960
BioProject PRJNA177721

Experiment Details

Title Footprints from cells infected with HCMV for 72hr, pretreated with LTM

Sample Details

Run Accession SRR592960
Total Number Of Spots (Original File)) 46160824
Total Number Of Bases (Original File) 2308041200
Average Read Length 50
Original File Size (Mb) 1530
Experiment Id SRX195695
Library Strategy RNA-Seq
Library Selection cDNA
Library Source TRANSCRIPTOMIC
Library Layout SINGLE
Insert Size 0
Insert Deviation 0
Platform ILLUMINA
Model Illumina HiSeq 2000
Sra Project Accession (Srp) SRP016143
Pubmed Id 23180859
Sample SRS369474
Biosample SAMN01766546
Sample Type simple
Organism Taxid 10359
Organism Human betaherpesvirus 5
Sample Name GSM1020241
Center Name GEO
Submission SRA059587
Month 7
Year 2015
Author Stern-Ginossar
Sample Source Human fibroblasts infected with HCMV, LTM, 72hr
Sample Title Footprints from cells infected with HCMV for 72hr, pretreated with LTM
Library-Type Ribo-Seq
Inhibitor Lactimidomycin
Timepoint 72hr
Tissue Skin
Cell-Line Fibroblast
Strain Merlin
Run Accession Study Accession Scientific Name Description Cell Line Library Type Treatment Trips-Viz GWIPS-viz Reads BAM BigWig (F) BigWig (R)
SRR592960 Human betaherpesvirus 5 Human fibroblasts infected with HCMV, LTM, 72hr Fibroblast Ribo-Seq Lactimidomycin
Run Accession Study Accession Scientific Name Description Cell Line Library Type Treatment Trips-Viz GWIPS-viz Reads BAM BigWig (F) BigWig (R)

ⓘ For more Information on the columns shown here see: About