SRR592961 (PRJNA177721)

General Details

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Sample Name GSM1020242
Organism Human betaherpesvirus 5
Release Date 7/2015

Sample Links

Run Details

Spots 21624068
Total Bases 864962720
Total Bases 864962720

Repository Details

SRA SRR592961
ENA SRR592961
BioProject PRJNA177721

Experiment Details

Title Footprints from cells infected with HCMV for 5hr, no drug pretreatment

Sample Details

Run Accession SRR592961
Total Number Of Spots (Original File)) 21624068
Total Number Of Bases (Original File) 864962720
Average Read Length 40
Original File Size (Mb) 586
Experiment Id SRX195696
Library Strategy RNA-Seq
Library Selection cDNA
Library Source TRANSCRIPTOMIC
Library Layout SINGLE
Insert Size 0
Insert Deviation 0
Platform ILLUMINA
Model Illumina Genome Analyzer II
Sra Project Accession (Srp) SRP016143
Pubmed Id 23180859
Sample SRS369475
Biosample SAMN01766547
Sample Type simple
Organism Taxid 10359
Organism Human betaherpesvirus 5
Sample Name GSM1020242
Center Name GEO
Submission SRA059587
Month 7
Year 2015
Author Stern-Ginossar
Sample Source Human fibroblasts infected with HCMV, none, 5hr
Sample Title Footprints from cells infected with HCMV for 5hr, no drug pretreatment
Library-Type Ribo-Seq
Inhibitor Frozen
Timepoint 5hr
Tissue Skin
Cell-Line HCMV-infected human foreskin fibroblasts
Strain Merlin
Run Accession Study Accession Scientific Name Description Cell Line Library Type Treatment Trips-Viz GWIPS-viz Reads BAM BigWig (F) BigWig (R)
SRR592961 Human betaherpesvirus 5 Human fibroblasts infected with HCMV, none, 5hr HCMV-infected human foreskin fibroblasts Ribo-Seq Frozen
Run Accession Study Accession Scientific Name Description Cell Line Library Type Treatment Trips-Viz GWIPS-viz Reads BAM BigWig (F) BigWig (R)

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