SRR5952027 (PRJNA399133)
Processing Status: Not Yet Started
General Details
| Sample Name | GSM2747294 |
|---|---|
| Organism | Danio rerio |
| Release Date | 4/2018 |
Sample Links
| GWIPS-viz | Trips-Viz | Custom Track |
|---|---|---|
Run Details
| Spots | 33330363 |
|---|---|
| Total Bases | 4994833580 |
| Total Bases | 4994833580 |
Repository Details
| SRA | SRR5952027 |
|---|---|
| ENA | SRR5952027 |
| BioProject | PRJNA399133 |
Experiment Details
| Title | IP-HCtranslatome_RNAseq rep3 |
|---|
Sample Details
| Run Accession | SRR5952027 |
|---|---|
| Total Number Of Spots (Original File)) | 33330363 |
| Total Number Of Bases (Original File) | 4994833580 |
| Average Read Length | 74 |
| Original File Size (Mb) | 1965 |
| Experiment Id | SRX3110521 |
| Library Strategy | RIP-Seq |
| Library Selection | other |
| Library Source | TRANSCRIPTOMIC |
| Library Layout | PAIRED |
| Insert Size | 0 |
| Insert Deviation | 0 |
| Platform | ILLUMINA |
| Model | Illumina HiSeq 4000 |
| Sra Project Accession (Srp) | SRP115900 |
| Pubmed Id | 29765956 |
| Sample | SRS2445614 |
| Biosample | SAMN07522830 |
| Sample Type | simple |
| Organism Taxid | 7955 |
| Organism | Danio rerio |
| Sample Name | GSM2747294 |
| Center Name | GEO |
| Submission | SRA601675 |
| Month | 4 |
| Year | 2018 |
| Author | Matern |
| Sample Source | Tg(myo6b:GFP-2A-rpl10a-3xHA) |
| Sample Title | IP-HCtranslatome_RNAseq rep3 |
| Library-Type | RNA-Seq |
| Replicate-Number | 3.0 |
| Tissue | hair cells (enriched) |
| Stage | 5dpf |
| Antibody Used | HA |
| Run Accession | Study Accession | Scientific Name | Description | Cell Line | Library Type | Treatment | Trips-Viz | GWIPS-viz | Reads | BAM | BigWig (F) | BigWig (R) | |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| SRR5952027 | Danio rerio | Tg(myo6b:GFP-2A-rpl10a-3xHA) | RNA-Seq |  |
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| Run Accession | Study Accession | Scientific Name | Description | Cell Line | Library Type | Treatment | Trips-Viz | GWIPS-viz | Reads | BAM | BigWig (F) | BigWig (R) |
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