SRR5990828 (PRJNA401882)
Processing Status: Completed
General Details
| Sample Name | GSM2760253 |
|---|---|
| Organism | Homo sapiens |
| Release Date | 5/2018 |
Sample Links
| GWIPS-viz | Trips-Viz | Custom Track |
|---|---|---|
Run Details
| Spots | 28506876 |
|---|---|
| Total Bases | 1396836924 |
| Total Bases | 1396836924 |
Repository Details
| SRA | SRR5990828 |
|---|---|
| ENA | SRR5990828 |
| BioProject | PRJNA401882 |
Experiment Details
| Title | Infect, 3.5 h, RPF, rep1 |
|---|
Sample Details
| Run Accession | SRR5990828 |
|---|---|
| Total Number Of Spots (Original File)) | 28506876 |
| Total Number Of Bases (Original File) | 1396836924 |
| Average Read Length | 49 |
| Original File Size (Mb) | 535 |
| Experiment Id | SRX3146520 |
| Library Strategy | OTHER |
| Library Selection | cDNA |
| Library Source | TRANSCRIPTOMIC |
| Library Layout | SINGLE |
| Insert Size | 0 |
| Insert Deviation | 0 |
| Platform | ILLUMINA |
| Model | Illumina HiSeq 2000 |
| Sra Project Accession (Srp) | SRP131318 |
| Pubmed Id | 29696588 |
| Sample | SRS2478479 |
| Biosample | SAMN07573557 |
| Sample Type | simple |
| Organism Taxid | 9606 |
| Organism | Homo sapiens |
| Sample Name | GSM2760253 |
| Center Name | GEO |
| Submission | SRA604097 |
| Month | 5 |
| Year | 2018 |
| Author | Lin |
| Sample Source | muscle and virus |
| Sample Title | Infect, 3.5 h, RPF, rep1 |
| Library-Type | Ribo-Seq |
| Replicate-Number | 1.0 |
| Condition | Test |
| Inhibitor | Cycloheximide |
| Timepoint | 1.75 hNA |
| Tissue | Muscle |
| Cell-Line | RD |
| Infected | Enterovirus 71SK-EV006/Malaysia/97 |
| Run Accession | Study Accession | Scientific Name | Description | Cell Line | Library Type | Treatment | Trips-Viz | GWIPS-viz | Reads | BAM | BigWig (F) | BigWig (R) | |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| SRR5990828 | Homo sapiens | muscle and virus | RD | Ribo-Seq | Cycloheximide |  |
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| Run Accession | Study Accession | Scientific Name | Description | Cell Line | Library Type | Treatment | Trips-Viz | GWIPS-viz | Reads | BAM | BigWig (F) | BigWig (R) |
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