SRR6001739 (PRJNA401857)

Processing Status: Completed

General Details

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Sample Name GSM2770991
Organism Escherichia coli
Release Date 4/2018

Sample Links

Run Details

Spots 8816443
Total Bases 253931666
Total Bases 253931666

Repository Details

SRA SRR6001739
ENA SRR6001739
BioProject PRJNA401857

Experiment Details

Title Ribosome profiling 30 min after shift to 10°C in WT cells

Sample Details

Run Accession SRR6001739
Total Number Of Spots (Original File)) 8816443
Total Number Of Bases (Original File) 253931666
Average Read Length 28
Original File Size (Mb) 195
Experiment Id SRX3157109
Library Strategy RNA-Seq
Library Selection cDNA
Library Source TRANSCRIPTOMIC
Library Layout SINGLE
Insert Size 0
Insert Deviation 0
Platform ILLUMINA
Model Illumina Genome Analyzer II
Sra Project Accession (Srp) SRP117035
Pubmed Id 29628307
Sample SRS2488600
Biosample SAMN07602622
Sample Type simple
Organism Taxid 562
Organism Escherichia coli
Sample Name GSM2770991
Center Name GEO
Submission SRA605192
Month 4
Year 2018
Author Zhang
Sample Source MG1655
Sample Title Ribosome profiling 30 min after shift to 10°C in WT cells
Library-Type Ribo-Seq
Condition Wild Type
Strain MG1655
Genotype wild type
Temperature 10°C
Run Accession Study Accession Scientific Name Description Cell Line Library Type Treatment Trips-Viz GWIPS-viz Reads BAM BigWig (F) BigWig (R)
SRR6001739 Escherichia coli MG1655 Ribo-Seq
Run Accession Study Accession Scientific Name Description Cell Line Library Type Treatment Trips-Viz GWIPS-viz Reads BAM BigWig (F) BigWig (R)

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