SRR6001742 (PRJNA401857)

Processing Status: Completed

General Details

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Sample Name GSM2770994
Organism Escherichia coli
Release Date 4/2018

Sample Links

Run Details

Spots 5968378
Total Bases 168325033
Total Bases 168325033

Repository Details

SRA SRR6001742
ENA SRR6001742
BioProject PRJNA401857

Experiment Details

Title Ribosome profiling 4 hr after shift to 10°C in WT cells

Sample Details

Run Accession SRR6001742
Total Number Of Spots (Original File)) 5968378
Total Number Of Bases (Original File) 168325033
Average Read Length 28
Original File Size (Mb) 129
Experiment Id SRX3157112
Library Strategy RNA-Seq
Library Selection cDNA
Library Source TRANSCRIPTOMIC
Library Layout SINGLE
Insert Size 0
Insert Deviation 0
Platform ILLUMINA
Model Illumina Genome Analyzer II
Sra Project Accession (Srp) SRP117035
Pubmed Id 29628307
Sample SRS2488603
Biosample SAMN07602619
Sample Type simple
Organism Taxid 562
Organism Escherichia coli
Sample Name GSM2770994
Center Name GEO
Submission SRA605192
Month 4
Year 2018
Author Zhang
Sample Source MG1655
Sample Title Ribosome profiling 4 hr after shift to 10°C in WT cells
Library-Type Ribo-Seq
Condition Wild Type
Strain MG1655
Genotype wild type
Temperature 10°C
Run Accession Study Accession Scientific Name Description Cell Line Library Type Treatment Trips-Viz GWIPS-viz Reads BAM BigWig (F) BigWig (R)
SRR6001742 Escherichia coli MG1655 Ribo-Seq
Run Accession Study Accession Scientific Name Description Cell Line Library Type Treatment Trips-Viz GWIPS-viz Reads BAM BigWig (F) BigWig (R)

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