SRR6001744 (PRJNA401857)

Processing Status: Completed

General Details

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Sample Name GSM2770996
Organism Escherichia coli
Release Date 4/2018

Sample Links

Run Details

Spots 38289935
Total Bases 1914496750
Total Bases 1914496750

Repository Details

SRA SRR6001744
ENA SRR6001744
BioProject PRJNA401857

Experiment Details

Title Ribosome profiling 5 min after shift to 10°C in WT cells

Sample Details

Run Accession SRR6001744
Total Number Of Spots (Original File)) 38289935
Total Number Of Bases (Original File) 1914496750
Average Read Length 50
Original File Size (Mb) 1252
Experiment Id SRX3157114
Library Strategy RNA-Seq
Library Selection cDNA
Library Source TRANSCRIPTOMIC
Library Layout SINGLE
Insert Size 0
Insert Deviation 0
Platform ILLUMINA
Model Illumina HiSeq 2000
Sra Project Accession (Srp) SRP117035
Pubmed Id 29628307
Sample SRS2488605
Biosample SAMN07602617
Sample Type simple
Organism Taxid 562
Organism Escherichia coli
Sample Name GSM2770996
Center Name GEO
Submission SRA605192
Month 4
Year 2018
Author Zhang
Sample Source MG1655
Sample Title Ribosome profiling 5 min after shift to 10°C in WT cells
Library-Type Ribo-Seq
Condition Wild Type
Strain MG1655
Genotype wild type
Temperature 10°C
Run Accession Study Accession Scientific Name Description Cell Line Library Type Treatment Trips-Viz GWIPS-viz Reads BAM BigWig (F) BigWig (R)
SRR6001744 Escherichia coli MG1655 Ribo-Seq
Run Accession Study Accession Scientific Name Description Cell Line Library Type Treatment Trips-Viz GWIPS-viz Reads BAM BigWig (F) BigWig (R)

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