SRR6001748 (PRJNA401857)

Processing Status: Completed

General Details

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Sample Name GSM2770999
Organism Escherichia coli
Release Date 4/2018

Sample Links

Run Details

Spots 11622124
Total Bases 592728324
Total Bases 592728324

Repository Details

SRA SRR6001748
ENA SRR6001748
BioProject PRJNA401857

Experiment Details

Title Ribosome profiling 8 hr after shift to 10°C in WT cells

Sample Details

Run Accession SRR6001748
Total Number Of Spots (Original File)) 11622124
Total Number Of Bases (Original File) 592728324
Average Read Length 51
Original File Size (Mb) 378
Experiment Id SRX3157117
Library Strategy RNA-Seq
Library Selection cDNA
Library Source TRANSCRIPTOMIC
Library Layout SINGLE
Insert Size 0
Insert Deviation 0
Platform ILLUMINA
Model Illumina HiSeq 2000
Sra Project Accession (Srp) SRP117035
Pubmed Id 29628307
Sample SRS2488608
Biosample SAMN07602614
Sample Type simple
Organism Taxid 562
Organism Escherichia coli
Sample Name GSM2770999
Center Name GEO
Submission SRA605192
Month 4
Year 2018
Author Zhang
Sample Source MG1655
Sample Title Ribosome profiling 8 hr after shift to 10°C in WT cells
Library-Type Ribo-Seq
Condition Wild Type
Strain MG1655
Genotype {delta}cspABEG
Temperature 10°C
Run Accession Study Accession Scientific Name Description Cell Line Library Type Treatment Trips-Viz GWIPS-viz Reads BAM BigWig (F) BigWig (R)
SRR6001748 Escherichia coli MG1655 Ribo-Seq
Run Accession Study Accession Scientific Name Description Cell Line Library Type Treatment Trips-Viz GWIPS-viz Reads BAM BigWig (F) BigWig (R)

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