SRR6001749 (PRJNA401857)

Processing Status: Completed

General Details

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Sample Name GSM2771000
Organism Escherichia coli
Release Date 4/2018

Sample Links

Run Details

Spots 12537556
Total Bases 639415356
Total Bases 639415356

Repository Details

SRA SRR6001749
ENA SRR6001749
BioProject PRJNA401857

Experiment Details

Title Ribosome profiling 8 hr after shift to 10°C in ∆cspABEG cells

Sample Details

Run Accession SRR6001749
Total Number Of Spots (Original File)) 12537556
Total Number Of Bases (Original File) 639415356
Average Read Length 51
Original File Size (Mb) 436
Experiment Id SRX3157118
Library Strategy RNA-Seq
Library Selection cDNA
Library Source TRANSCRIPTOMIC
Library Layout SINGLE
Insert Size 0
Insert Deviation 0
Platform ILLUMINA
Model Illumina HiSeq 2000
Sra Project Accession (Srp) SRP117035
Pubmed Id 29628307
Sample SRS2488610
Biosample SAMN07602613
Sample Type simple
Organism Taxid 562
Organism Escherichia coli
Sample Name GSM2771000
Center Name GEO
Submission SRA605192
Month 4
Year 2018
Author Zhang
Sample Source MG1655 ∆cspABEG
Sample Title Ribosome profiling 8 hr after shift to 10°C in ∆cspABEG cells
Library-Type Ribo-Seq
Strain MG1655
Genotype wild type
Temperature 37°C
Run Accession Study Accession Scientific Name Description Cell Line Library Type Treatment Trips-Viz GWIPS-viz Reads BAM BigWig (F) BigWig (R)
SRR6001749 Escherichia coli MG1655 ∆cspABEG Ribo-Seq
Run Accession Study Accession Scientific Name Description Cell Line Library Type Treatment Trips-Viz GWIPS-viz Reads BAM BigWig (F) BigWig (R)

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