SRR606205 (PRJNA178171)

Processing Status: Completed

General Details

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Sample Name GSM1024313
Organism Mus musculus
Release Date 7/2015

Sample Links

Run Details

Spots 189624054
Total Bases 7584962160
Total Bases 7584962160

Repository Details

SRA SRR606205
ENA SRR606205
BioProject PRJNA178171

Experiment Details

Title Upf1-1_4.7_RiboSeq

Sample Details

Run Accession SRR606205
Total Number Of Spots (Original File)) 189624054
Total Number Of Bases (Original File) 7584962160
Average Read Length 40
Original File Size (Mb) 5077
Experiment Id SRX200674
Library Strategy RNA-Seq
Library Selection cDNA
Library Source TRANSCRIPTOMIC
Library Layout SINGLE
Insert Size 0
Insert Deviation 0
Platform ILLUMINA
Model Illumina HiSeq 2000
Sra Project Accession (Srp) SRP016625
Pubmed Id 23766421
Sample SRS372409
Biosample SAMN01779631
Sample Type simple
Organism Taxid 10090
Organism Mus musculus
Sample Name GSM1024313
Center Name GEO
Submission SRA060331
Month 7
Year 2015
Author Hurt
Sample Source Ribosome footprint profiling of Upf1-depleted
Sample Title Upf1-1_4.7_RiboSeq
Library-Type Ribo-Seq
Condition Wild Type
Cell-Line v6.5Embryonic stem cells
Run Accession Study Accession Scientific Name Description Cell Line Library Type Treatment Trips-Viz GWIPS-viz Reads BAM BigWig (F) BigWig (R)
SRR606205 Mus musculus Ribosome footprint profiling of Upf1-depleted v6.5Embryonic stem cells Ribo-Seq
Run Accession Study Accession Scientific Name Description Cell Line Library Type Treatment Trips-Viz GWIPS-viz Reads BAM BigWig (F) BigWig (R)

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