SRR609197 (PRJNA177721)

Processing Status: Failed

General Details

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Sample Name GSM1020234
Organism Human betaherpesvirus 5
Release Date 7/2015

Sample Links

Run Details

Spots 23804050
Total Bases 952162000
Total Bases 952162000

Repository Details

SRA SRR609197
ENA SRR609197
BioProject PRJNA177721

Experiment Details

Title Footprints from cells infected with HCMV for 5hr, pretreated with cycloheximide

Sample Details

Run Accession SRR609197
Total Number Of Spots (Original File)) 23804050
Total Number Of Bases (Original File) 952162000
Average Read Length 40
Original File Size (Mb) 614
Experiment Id SRX201524
Library Strategy RNA-Seq
Library Selection cDNA
Library Source TRANSCRIPTOMIC
Library Layout SINGLE
Insert Size 0
Insert Deviation 0
Platform ILLUMINA
Model Illumina Genome Analyzer II
Sra Project Accession (Srp) SRP016143
Pubmed Id 23180859
Sample SRS373150
Biosample SAMN01795915
Sample Type simple
Organism Taxid 10359
Organism Human betaherpesvirus 5
Sample Name GSM1020234
Center Name GEO
Submission SRA059587
Month 7
Year 2015
Author Stern-Ginossar
Sample Source Human fibroblasts infected with HCMV, cycloheximide, 5hr
Sample Title Footprints from cells infected with HCMV for 5hr, pretreated with cycloheximide
Library-Type Ribo-Seq
Inhibitor Cycloheximide
Timepoint 5hr
Tissue Skin
Cell-Line Fibroblast
Strain Merlin
Run Accession Study Accession Scientific Name Description Cell Line Library Type Treatment Trips-Viz GWIPS-viz Reads BAM BigWig (F) BigWig (R)
SRR609197 Human betaherpesvirus 5 Human fibroblasts infected with HCMV, cycloheximide, 5hr Fibroblast Ribo-Seq Cycloheximide
Run Accession Study Accession Scientific Name Description Cell Line Library Type Treatment Trips-Viz GWIPS-viz Reads BAM BigWig (F) BigWig (R)

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