SRR6107148 (PRJNA412370)
Processing Status: Failed
General Details
| Sample Name | GSM2795497 |
|---|---|
| Organism | Homo sapiens |
| Release Date | 5/2020 |
Sample Links
| GWIPS-viz | Trips-Viz | Custom Track |
|---|---|---|
Run Details
| Spots | 56564807 |
|---|---|
| Total Bases | 2884805157 |
| Total Bases | 2884805157 |
Repository Details
| SRA | SRR6107148 |
|---|---|
| ENA | SRR6107148 |
| BioProject | PRJNA412370 |
Experiment Details
| Title | CFBE RPF with RPL12 siRNA treatment, harringtonine chased for 90s |
|---|
Sample Details
| Run Accession | SRR6107148 |
|---|---|
| Total Number Of Spots (Original File)) | 56564807 |
| Total Number Of Bases (Original File) | 2884805157 |
| Average Read Length | 51 |
| Original File Size (Mb) | 1597 |
| Experiment Id | SRX3222181 |
| Library Strategy | RNA-Seq |
| Library Selection | cDNA |
| Library Source | TRANSCRIPTOMIC |
| Library Layout | SINGLE |
| Insert Size | 0 |
| Insert Deviation | 0 |
| Platform | ILLUMINA |
| Model | Illumina HiSeq 2000 |
| Sra Project Accession (Srp) | SRP118987 |
| Pubmed Id | 31657788 |
| Sample | SRS2546780 |
| Biosample | SAMN07710455 |
| Sample Type | simple |
| Organism Taxid | 9606 |
| Organism | Homo sapiens |
| Sample Name | GSM2795497 |
| Center Name | GEO |
| Submission | SRA614199 |
| Month | 5 |
| Year | 2020 |
| Author | Oliver |
| Sample Source | CFBE RPF with RPL12 siRNA treatment, harringtonine chased for 90s |
| Sample Title | CFBE RPF with RPL12 siRNA treatment, harringtonine chased for 90s |
| Library-Type | Ribo-Seq |
| Condition | Test |
| Inhibitor | Harringtonine |
| Cell-Line | CFBE cells |
| Run Accession | Study Accession | Scientific Name | Description | Cell Line | Library Type | Treatment | Trips-Viz | GWIPS-viz | Reads | BAM | BigWig (F) | BigWig (R) | |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| SRR6107148 | Homo sapiens | CFBE RPF with RPL12 siRNA treatment, harringtonine chased for 90s | CFBE cells | Ribo-Seq | Harringtonine |  |
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| Run Accession | Study Accession | Scientific Name | Description | Cell Line | Library Type | Treatment | Trips-Viz | GWIPS-viz | Reads | BAM | BigWig (F) | BigWig (R) |
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