SRR618772 (PRJNA171327)

Processing Status: Completed

General Details

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Sample Name HEK293_LTM_Rep1
Organism Homo sapiens
Release Date 11/2012

Sample Links

Run Details

Spots 15628782
Total Bases 750181536
Total Bases 750181536

Repository Details

SRA SRR618772
ENA SRR618772
BioProject PRJNA171327

Experiment Details

Title Ribosome profiling of HEK293 cells treated with lactimidomycin, technical replicate #1

Sample Details

Run Accession SRR618772
Total Number Of Spots (Original File)) 15628782
Total Number Of Bases (Original File) 750181536
Average Read Length 48
Original File Size (Mb) 491
Experiment Id SRX172360
Library Name HEK293_LTM_Rep1
Library Strategy RNA-Seq
Library Selection size fractionation
Library Source TRANSCRIPTOMIC
Library Layout SINGLE
Insert Size 0
Insert Deviation 0
Platform ILLUMINA
Model Illumina HiSeq 2000
Sra Project Accession (Srp) SRP014629
Pubmed Id <NA>
Sample SRS351807
Biosample SAMN01093933
Sample Type simple
Organism Taxid 9606
Organism Homo sapiens
Sample Name HEK293_LTM_Rep1
Center Name Cornell University
Submission SRA056377
Month 11
Year 2012
Sample Title Ribosome profiling of HEK293 cells treated with lactimidomycin, technical replicate #1
Library-Type Ribo-Seq
Replicate-Number 1.0
Inhibitor Lactimidomycin
Tissue Kidney
Cell-Line HEK293
Run Accession Study Accession Scientific Name Description Cell Line Library Type Treatment Trips-Viz GWIPS-viz Reads BAM BigWig (F) BigWig (R)
SRR618772 Homo sapiens HEK293 Ribo-Seq Lactimidomycin
Run Accession Study Accession Scientific Name Description Cell Line Library Type Treatment Trips-Viz GWIPS-viz Reads BAM BigWig (F) BigWig (R)

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