SRR618773 (PRJNA171327)

Processing Status: Completed

General Details

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Sample Name HEK293_LTM_Rep2
Organism Homo sapiens
Release Date 11/2012

Sample Links

Run Details

Spots 28457106
Total Bases 1365941088
Total Bases 1365941088

Repository Details

SRA SRR618773
ENA SRR618773
BioProject PRJNA171327

Experiment Details

Title Ribosome profiling of HEK293 cells treated with lactimidomycin, technical replicate #2

Sample Details

Run Accession SRR618773
Total Number Of Spots (Original File)) 28457106
Total Number Of Bases (Original File) 1365941088
Average Read Length 48
Original File Size (Mb) 850
Experiment Id SRX172392
Library Name HEK293_LTM_Rep2
Library Strategy RNA-Seq
Library Selection size fractionation
Library Source TRANSCRIPTOMIC
Library Layout SINGLE
Insert Size 0
Insert Deviation 0
Platform ILLUMINA
Model Illumina HiSeq 2000
Sra Project Accession (Srp) SRP014629
Pubmed Id <NA>
Sample SRS351808
Biosample SAMN01093934
Sample Type simple
Organism Taxid 9606
Organism Homo sapiens
Sample Name HEK293_LTM_Rep2
Center Name Cornell University
Submission SRA056377
Month 11
Year 2012
Sample Title Ribosome profiling of HEK293 cells treated with lactimidomycin, technical replicate #2
Library-Type Ribo-Seq
Replicate-Number 2.0
Inhibitor Lactimidomycin
Tissue Kidney
Cell-Line HEK293
Run Accession Study Accession Scientific Name Description Cell Line Library Type Treatment Trips-Viz GWIPS-viz Reads BAM BigWig (F) BigWig (R)
SRR618773 Homo sapiens HEK293 Ribo-Seq Lactimidomycin
Run Accession Study Accession Scientific Name Description Cell Line Library Type Treatment Trips-Viz GWIPS-viz Reads BAM BigWig (F) BigWig (R)

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