SRR648670 (PRJNA147613)
Processing Status: Completed
General Details
| Sample Name | GSM1063578 |
|---|---|
| Organism | Homo sapiens |
| Release Date | 7/2015 |
Sample Links
| GWIPS-viz | Trips-Viz | Custom Track |
|---|---|---|
Run Details
| Spots | 100614542 |
|---|---|
| Total Bases | 3622123512 |
| Total Bases | 3622123512 |
Repository Details
| SRA | SRR648670 |
|---|---|
| ENA | SRR648670 |
| BioProject | PRJNA147613 |
Experiment Details
| Title | 293T_Hspa1a_2hrs_severe_Heat_Shock |
|---|
Sample Details
| Run Accession | SRR648670 |
|---|---|
| Total Number Of Spots (Original File)) | 100614542 |
| Total Number Of Bases (Original File) | 3622123512 |
| Average Read Length | 36 |
| Original File Size (Mb) | 2143 |
| Experiment Id | SRX217031 |
| Library Strategy | RNA-Seq |
| Library Selection | other |
| Library Source | TRANSCRIPTOMIC |
| Library Layout | SINGLE |
| Insert Size | 0 |
| Insert Deviation | 0 |
| Platform | ILLUMINA |
| Model | Illumina Genome Analyzer II |
| Sra Project Accession (Srp) | SRP017942 |
| Pubmed Id | 23290915 |
| Sample | SRS385798 |
| Biosample | SAMN01886426 |
| Sample Type | simple |
| Organism Taxid | 9606 |
| Organism | Homo sapiens |
| Sample Name | GSM1063578 |
| Center Name | GEO |
| Submission | SRA064749 |
| Month | 7 |
| Year | 2015 |
| Author | Shalgi |
| Sample Source | 293T cells |
| Sample Title | 293T_Hspa1a_2hrs_severe_Heat_Shock |
| Library-Type | Ribo-Seq |
| Condition | Test |
| Timepoint | 2h |
| Tissue | Kidney |
| Cell-Line | HEK293 |
| Plasmid | 3XFLAG-Hspa1a |
| Run Accession | Study Accession | Scientific Name | Description | Cell Line | Library Type | Treatment | Trips-Viz | GWIPS-viz | Reads | BAM | BigWig (F) | BigWig (R) | |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| SRR648670 | Homo sapiens | 293T cells | HEK293 | Ribo-Seq |  |
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| Run Accession | Study Accession | Scientific Name | Description | Cell Line | Library Type | Treatment | Trips-Viz | GWIPS-viz | Reads | BAM | BigWig (F) | BigWig (R) |
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