SRR6507970 (PRJNA401857)

Processing Status: Not Yet Started

General Details

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Sample Name GSM2946869
Organism Escherichia coli
Release Date 4/2018

Sample Links

Run Details

Spots 118571
Total Bases 71142600
Total Bases 71142600

Repository Details

SRA SRR6507970
ENA SRR6507970
BioProject PRJNA401857

Experiment Details

Title DMS-MaPSeq of purified cspA mRNA at 10°C with 0.1mM CspA protein, rep 2

Sample Details

Run Accession SRR6507970
Total Number Of Spots (Original File)) 118571
Total Number Of Bases (Original File) 71142600
Average Read Length 300
Original File Size (Mb) 25
Experiment Id SRX3596412
Library Strategy OTHER
Library Selection other
Library Source TRANSCRIPTOMIC
Library Layout PAIRED
Insert Size 0
Insert Deviation 0
Platform ILLUMINA
Model Illumina MiSeq
Sra Project Accession (Srp) SRP117035
Pubmed Id 29628307
Sample SRS2864736
Biosample SAMN08391112
Sample Type simple
Organism Taxid 511145
Organism Escherichia coli
Sample Name GSM2946869
Center Name GEO
Submission SRA605192
Month 4
Year 2018
Author Zhang
Sample Source DMS-MaPSeq of purified cspA mRNA at 10°C with 0.1mM CspA protein
Sample Title DMS-MaPSeq of purified cspA mRNA at 10°C with 0.1mM CspA protein, rep 2
Library-Type RNA-Seq
Replicate-Number 2.0
Strain MG1655
Genotype wild type
Temperature 10°C
Run Accession Study Accession Scientific Name Description Cell Line Library Type Treatment Trips-Viz GWIPS-viz Reads BAM BigWig (F) BigWig (R)
SRR6507970 Escherichia coli DMS-MaPSeq of purified cspA mRNA at 10°C with 0.1mM CspA protein RNA-Seq
Run Accession Study Accession Scientific Name Description Cell Line Library Type Treatment Trips-Viz GWIPS-viz Reads BAM BigWig (F) BigWig (R)

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