SRR6507971 (PRJNA401857)
Processing Status: Not Yet Started
General Details
| Sample Name | GSM2946870 |
|---|---|
| Organism | Escherichia coli |
| Release Date | 4/2018 |
Sample Links
| GWIPS-viz | Trips-Viz | Custom Track |
|---|---|---|
Run Details
| Spots | 136697 |
|---|---|
| Total Bases | 82018200 |
| Total Bases | 82018200 |
Repository Details
| SRA | SRR6507971 |
|---|---|
| ENA | SRR6507971 |
| BioProject | PRJNA401857 |
Experiment Details
| Title | DMS-MaPSeq of purified cspA mRNA at 10°C with 0.1mM CspA protein, rep 3 |
|---|
Sample Details
| Run Accession | SRR6507971 |
|---|---|
| Total Number Of Spots (Original File)) | 136697 |
| Total Number Of Bases (Original File) | 82018200 |
| Average Read Length | 300 |
| Original File Size (Mb) | 29 |
| Experiment Id | SRX3596413 |
| Library Strategy | OTHER |
| Library Selection | other |
| Library Source | TRANSCRIPTOMIC |
| Library Layout | PAIRED |
| Insert Size | 0 |
| Insert Deviation | 0 |
| Platform | ILLUMINA |
| Model | Illumina MiSeq |
| Sra Project Accession (Srp) | SRP117035 |
| Pubmed Id | 29628307 |
| Sample | SRS2864738 |
| Biosample | SAMN08391111 |
| Sample Type | simple |
| Organism Taxid | 511145 |
| Organism | Escherichia coli |
| Sample Name | GSM2946870 |
| Center Name | GEO |
| Submission | SRA605192 |
| Month | 4 |
| Year | 2018 |
| Author | Zhang |
| Sample Source | DMS-MaPSeq of purified cspA mRNA at 10°C with 0.1mM CspA protein |
| Sample Title | DMS-MaPSeq of purified cspA mRNA at 10°C with 0.1mM CspA protein, rep 3 |
| Library-Type | RNA-Seq |
| Replicate-Number | 3.0 |
| Strain | MG1655 |
| Genotype | wild type |
| Temperature | 10°C |
| Run Accession | Study Accession | Scientific Name | Description | Cell Line | Library Type | Treatment | Trips-Viz | GWIPS-viz | Reads | BAM | BigWig (F) | BigWig (R) | |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| SRR6507971 | Escherichia coli | DMS-MaPSeq of purified cspA mRNA at 10°C with 0.1mM CspA protein | RNA-Seq |  |
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| Run Accession | Study Accession | Scientific Name | Description | Cell Line | Library Type | Treatment | Trips-Viz | GWIPS-viz | Reads | BAM | BigWig (F) | BigWig (R) |
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