SRR652152 (PRJNA187087)
Processing Status: Completed
General Details
| Sample Name | GSM1068667 |
|---|---|
| Organism | Arabidopsis thaliana |
| Release Date | 11/2013 |
Sample Links
| GWIPS-viz | Trips-Viz | Custom Track |
|---|---|---|
| Visit GWIPS-viz |
Run Details
| Spots | 172442676 |
|---|---|
| Total Bases | 8794576476 |
| Total Bases | 8794576476 |
Repository Details
| SRA | SRR652152 |
|---|---|
| ENA | SRR652152 |
| BioProject | PRJNA187087 |
Experiment Details
| Title | mRNARP-Dark |
|---|
Sample Details
| Run Accession | SRR652152 |
|---|---|
| Total Number Of Spots (Original File)) | 172442676 |
| Total Number Of Bases (Original File) | 8794576476 |
| Average Read Length | 51 |
| Original File Size (Mb) | 5499 |
| Experiment Id | SRX219169 |
| Library Strategy | RNA-Seq |
| Library Selection | cDNA |
| Library Source | TRANSCRIPTOMIC |
| Library Layout | SINGLE |
| Insert Size | 0 |
| Insert Deviation | 0 |
| Platform | ILLUMINA |
| Model | Illumina HiSeq 2000 |
| Sra Project Accession (Srp) | SRP018118 |
| Pubmed Id | 24179124 |
| Sample | SRS387142 |
| Biosample | SAMN01894201 |
| Sample Type | simple |
| Organism Taxid | 3702 |
| Organism | Arabidopsis thaliana |
| Sample Name | GSM1068667 |
| Center Name | GEO |
| Submission | SRA065446 |
| Month | 11 |
| Year | 2013 |
| Author | Liu |
| Sample Source | ribosome-protectedl mRNAs from 4-day old etiolated seedling |
| Sample Title | mRNARP-Dark |
| Library-Type | Ribo-Seq |
| Condition | Control |
| Tissue | Seedling |
| Run Accession | Study Accession | Scientific Name | Description | Cell Line | Library Type | Treatment | Trips-Viz | GWIPS-viz | Reads | BAM | BigWig (F) | BigWig (R) | |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| SRR652152 | Arabidopsis thaliana | ribosome-protectedl mRNAs from 4-day old etiolated seedling | Ribo-Seq |  |
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| Run Accession | Study Accession | Scientific Name | Description | Cell Line | Library Type | Treatment | Trips-Viz | GWIPS-viz | Reads | BAM | BigWig (F) | BigWig (R) |
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