SRR6661169 (PRJNA432508)
Processing Status: Completed
General Details
Sample Name | GSM2975542 |
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Organism | Drosophila melanogaster |
Release Date | 3/2020 |
Sample Links
GWIPS-viz | Trips-Viz | Custom Track |
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Run Details
Spots | 12576811 |
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Total Bases | 955837636 |
Total Bases | 955837636 |
Repository Details
SRA | SRR6661169 |
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ENA | SRR6661169 |
BioProject | PRJNA432508 |
Experiment Details
Title | S2 cell ribosomal footprinting GFP-dsRNA-treated replicate 1 |
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Sample Details
Run Accession | SRR6661169 |
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Total Number Of Spots (Original File)) | 12576811 |
Total Number Of Bases (Original File) | 955837636 |
Average Read Length | 76 |
Original File Size (Mb) | 313 |
Experiment Id | SRX3638265 |
Library Name | 0.0 |
Library Strategy | RNA-Seq |
Library Selection | cDNA |
Library Source | TRANSCRIPTOMIC |
Library Layout | SINGLE |
Insert Size | 0 |
Insert Deviation | 0 |
Platform | ILLUMINA |
Model | NextSeq 500 |
Sra Project Accession (Srp) | SRP131957 |
Pubmed Id | 30967537 |
Sample | SRS2904515 |
Biosample | SAMN08451050 |
Sample Type | simple |
Organism Taxid | 7227 |
Organism | Drosophila melanogaster |
Sample Name | GSM2975542 |
Center Name | GEO |
Submission | SRA654642 |
Month | 3 |
Year | 2020 |
Author | Wessels |
Sample Source | S2 cell ribosomal footprinting GFP-dsRNA-treated |
Sample Title | S2 cell ribosomal footprinting GFP-dsRNA-treated replicate 1 |
Library-Type | Ribo-Seq |
Replicate-Number | 1.0 |
Condition | Test |
Inhibitor | 0.0 |
Timepoint | NANA |
Tissue | Embryo |
Cell-Line | S2 |
Cellular-Compartment | 0.0 |
Stage | 0.0 |
Gene | 0.0 |
Sex | 0.0 |
Strain | 0.0 |
Age | 0.0 |
Infected | 0.0 |
Disease | 0.0 |
Genotype | 0.0 |
Feeding | 0.0 |
Temperature | 0.0 |
Sirna | 0.0 |
Sgrna | 0.0 |
Shrna | 0.0 |
Plasmid | dsRNA GFP (5µg/ml) |
Growth-Condition | 0.0 |
Stress | 0.0 |
Cancer | 0.0 |
Microrna | 0.0 |
Individual | 0.0 |
Antibody Used | 0.0 |
Ethnicity | 0.0 |
Dose | 0.0 |
Stimulation | 0.0 |
Host Organism | 0.0 |
Unique Molecular Identifier (Umi) | 0.0 |
Adapter Sequence | 0.0 |
Mode Of Separation | 0.0 |
Mode Of Rrna Depletion | 0.0 |
Barcode Information | 0.0 |
Nucelase Used | 0.0 |
Kit Used | 0.0 |
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