SRR6661177 (PRJNA432508)

Processing Status: Completed

General Details

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Sample Name GSM2975550
Organism Drosophila melanogaster
Release Date 3/2020

Sample Links

Run Details

Spots 13226527
Total Bases 1005216052
Total Bases 1005216052

Repository Details

SRA SRR6661177
ENA SRR6661177
BioProject PRJNA432508

Experiment Details

Title S2 cell ribosomal footprinting AGO1-dsRNA-treated replicate 3

Sample Details

Run Accession SRR6661177
Total Number Of Spots (Original File)) 13226527
Total Number Of Bases (Original File) 1005216052
Average Read Length 76
Original File Size (Mb) 335
Experiment Id SRX3638273
Library Strategy RNA-Seq
Library Selection cDNA
Library Source TRANSCRIPTOMIC
Library Layout SINGLE
Insert Size 0
Insert Deviation 0
Platform ILLUMINA
Model NextSeq 500
Sra Project Accession (Srp) SRP131957
Pubmed Id 30967537
Sample SRS2904523
Biosample SAMN08451042
Sample Type simple
Organism Taxid 7227
Organism Drosophila melanogaster
Sample Name GSM2975550
Center Name GEO
Submission SRA654642
Month 3
Year 2020
Author Wessels
Sample Source S2 cell ribosomal footprinting AGO1-dsRNA-treated
Sample Title S2 cell ribosomal footprinting AGO1-dsRNA-treated replicate 3
Library-Type Ribo-Seq
Replicate-Number 3.0
Tissue Embryo
Cell-Line S2
Plasmid dsRNA AGO1 (5µg/ml)
Run Accession Study Accession Scientific Name Description Cell Line Library Type Treatment Trips-Viz GWIPS-viz Reads BAM BigWig (F) BigWig (R)
SRR6661177 Drosophila melanogaster S2 cell ribosomal footprinting AGO1-dsRNA-treated S2 Ribo-Seq
Run Accession Study Accession Scientific Name Description Cell Line Library Type Treatment Trips-Viz GWIPS-viz Reads BAM BigWig (F) BigWig (R)

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