SRR6841606 (PRJNA438489)

Processing Status: Completed

General Details

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Sample Name GSM3043642
Organism Mus musculus
Release Date 6/2018

Sample Links

Run Details

Spots 28749882
Total Bases 828591922
Total Bases 828591922

Repository Details

SRA SRR6841606
ENA SRR6841606
BioProject PRJNA438489

Experiment Details

Title Ribosome-Protected Fragments - shCTL - Replicate C

Sample Details

Run Accession SRR6841606
Total Number Of Spots (Original File)) 28749882
Total Number Of Bases (Original File) 828591922
Average Read Length 28
Original File Size (Mb) 366
Experiment Id SRX3797433
Library Strategy OTHER
Library Selection other
Library Source TRANSCRIPTOMIC
Library Layout SINGLE
Insert Size 0
Insert Deviation 0
Platform ILLUMINA
Model NextSeq 500
Sra Project Accession (Srp) SRP135781
Pubmed Id 29925953
Sample SRS3049490
Biosample SAMN08717855
Sample Type simple
Organism Taxid 10090
Organism Mus musculus
Sample Name GSM3043642
Center Name GEO
Submission SRA666803
Month 6
Year 2018
Author Rapino
Sample Source B16 melanoma cell line
Sample Title Ribosome-Protected Fragments - shCTL - Replicate C
Library-Type Ribo-Seq
Replicate-Number 3.0
Cell-Line B16melanoma cell line
Cellular-Compartment Ribosome-protected fragments
Run Accession Study Accession Scientific Name Description Cell Line Library Type Treatment Trips-Viz GWIPS-viz Reads BAM BigWig (F) BigWig (R)
SRR6841606 Mus musculus B16 melanoma cell line B16melanoma cell line Ribo-Seq
Run Accession Study Accession Scientific Name Description Cell Line Library Type Treatment Trips-Viz GWIPS-viz Reads BAM BigWig (F) BigWig (R)

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