SRR6841608 (PRJNA438489)

Processing Status: Completed

General Details

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Sample Name GSM3043644
Organism Mus musculus
Release Date 6/2018

Sample Links

Run Details

Spots 31089580
Total Bases 885749399
Total Bases 885749399

Repository Details

SRA SRR6841608
ENA SRR6841608
BioProject PRJNA438489

Experiment Details

Title Ribosome-Protected Fragments - sh309 - Replicate B

Sample Details

Run Accession SRR6841608
Total Number Of Spots (Original File)) 31089580
Total Number Of Bases (Original File) 885749399
Average Read Length 28
Original File Size (Mb) 394
Experiment Id SRX3797435
Library Strategy OTHER
Library Selection other
Library Source TRANSCRIPTOMIC
Library Layout SINGLE
Insert Size 0
Insert Deviation 0
Platform ILLUMINA
Model NextSeq 500
Sra Project Accession (Srp) SRP135781
Pubmed Id 29925953
Sample SRS3049492
Biosample SAMN08717858
Sample Type simple
Organism Taxid 10090
Organism Mus musculus
Sample Name GSM3043644
Center Name GEO
Submission SRA666803
Month 6
Year 2018
Author Rapino
Sample Source B16 melanoma cell line
Sample Title Ribosome-Protected Fragments - sh309 - Replicate B
Library-Type Ribo-Seq
Replicate-Number 2.0
Cell-Line B16melanoma cell line
Cellular-Compartment Ribosome-protected fragments
Run Accession Study Accession Scientific Name Description Cell Line Library Type Treatment Trips-Viz GWIPS-viz Reads BAM BigWig (F) BigWig (R)
SRR6841608 Mus musculus B16 melanoma cell line B16melanoma cell line Ribo-Seq
Run Accession Study Accession Scientific Name Description Cell Line Library Type Treatment Trips-Viz GWIPS-viz Reads BAM BigWig (F) BigWig (R)

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