SRR7182548 (PRJNA472015)

Processing Status: Completed

General Details

View quality reports

Sample Name GSM3146277
Organism Homo sapiens
Release Date 5/2018

Sample Links

Run Details

Spots 22603759
Total Bases 1130187950
Total Bases 1130187950

Repository Details

SRA SRR7182548
ENA SRR7182548
BioProject PRJNA472015

Experiment Details

Title ribosome footprints_cyclo_vir

Sample Details

Run Accession SRR7182548
Total Number Of Spots (Original File)) 22603759
Total Number Of Bases (Original File) 1130187950
Average Read Length 50
Original File Size (Mb) 462
Experiment Id SRX4099347
Library Strategy OTHER
Library Selection other
Library Source TRANSCRIPTOMIC
Library Layout SINGLE
Insert Size 0
Insert Deviation 0
Platform ILLUMINA
Model Illumina HiSeq 2500
Sra Project Accession (Srp) SRP148422
Pubmed Id 30673779
Sample SRS3315532
Biosample SAMN09223526
Sample Type simple
Organism Taxid 9606
Organism Homo sapiens
Sample Name GSM3146277
Center Name GEO
Submission SRA706809
Month 5
Year 2018
Author Machkovech
Sample Source A549 cells
Sample Title ribosome footprints_cyclo_vir
Library-Type Ribo-Seq
Inhibitor Cycloheximide
Tissue Lung
Cell-Line A549
Infected influenza virus mixture of low and high CTG NP (reassortant A/PeurtoRico/1934 (PA, PB1, PB2) and A/WSN/1933 (M, NS, HA, NA) and either low or high CTG PR8 NP)
Run Accession Study Accession Scientific Name Description Cell Line Library Type Treatment Trips-Viz GWIPS-viz Reads BAM BigWig (F) BigWig (R)
SRR7182548 Homo sapiens A549 cells A549 Ribo-Seq Cycloheximide
Run Accession Study Accession Scientific Name Description Cell Line Library Type Treatment Trips-Viz GWIPS-viz Reads BAM BigWig (F) BigWig (R)

ⓘ For more Information on the columns shown here see: About